Algicella marina: GO499_16845
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Entry
GO499_16845 CDS
T08414
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
amaq
Algicella marina
Pathway
amaq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amaq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GO499_16845 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amaq03019
]
GO499_16845 (pnp)
03016 Transfer RNA biogenesis [BR:
amaq03016
]
GO499_16845 (pnp)
Enzymes [BR:
amaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GO499_16845 (pnp)
Messenger RNA biogenesis [BR:
amaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GO499_16845 (pnp)
Transfer RNA biogenesis [BR:
amaq03016
]
Prokaryotic type
tRNA degradation factors
GO499_16845 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
PNPase
KH_1
S1_RRP5
KH-I_KHDC4-BBP
BioW
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QHQ36723
UniProt:
A0A6P1T4V2
LinkDB
All DBs
Position
3437321..3439450
Genome browser
AA seq
709 aa
AA seq
DB search
MFNEIKRSIEWGHDTLTLETGKIARQADASVIATYGETSVMAAVVFEKKPKEGFDFFPLT
VHYQEKYYAAGKIPGGFFKREARPTEKETLTSRLIDRPIRPLFVPGFKHETQVICTVLSH
DLENDPDVVAMIAASAALTLSGAPFLGPIGCARVGFVDGDYILNPAVEDMQGLRNNPEQR
LDLVVAGTKDAVMMVESEAYELSEAEMLGAVKFGHDQMQPVIDMILDLAGEAAKEPFDFQ
SPDYSDLYAKVQAAGEEAMRAAFAITDKQERTAAVSAARETVKAALSEEELEDKNLGSAM
KKLESSVVRGDILKTGKRIDGRDLSTVRPIVAEAGLLPRTHGSALFTRGETQGLVVTTLG
TGDDEQIIDALHGESRSNFMLHYNFPPYSVGEAGRMMGPGRREIGHGKLAWRALQAVLPA
ATDFPYTIRVVSEITESNGSSSMASVCGGSLSMMDAGVPLKAPVAGVAMGLILEGSDFAV
LTDILGDEDHLGDMDFKVAGTENGITSLQMDIKVAGITPSIMEQALAQAKDGRLHILNEM
GKALAEGRNEFSAHAPRIETMNVPTDKIREVIGSGGKVIREIVETSGAKVDINDDGVIKI
ASPNAEAIEKARGMIHAIVAEPEVGEIYTGKVVKIMDFGAFVNFFGKRDGLVHVSQMSNE
RVGHPKDVVQEGQDVKVKLMGFDDRGKVRLSMKVVDQSTGKEITESEEA
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatgaaatcaagagatccatcgagtggggccatgacaccctgacgctggaaacg
ggcaagattgcccgccaggcagatgccagtgttatcgccacctacggcgaaaccagcgtc
atggccgctgtcgtcttcgaaaagaagccgaaggaagggttcgatttctttccgctgacg
gttcactaccaggaaaaatactacgcagccggcaagatccccggcgggttcttcaagcgt
gaggcacggcccaccgagaaggaaacgctgacaagccgcctgatcgaccgcccgatccgc
ccgctgttcgtgccgggcttcaagcacgagacgcaggtaatctgcaccgtgctgtcccac
gatctggaaaatgatccggacgtggtggcgatgatcgccgcctccgccgctctcacgctg
tccggtgcgccgttcctcggcccgatcgggtgcgcgcgcgtcggtttcgtggatggcgac
tacatcctgaacccggctgtcgaagacatgcagggcctgcgcaacaaccccgagcagcgg
ctcgatctggtggttgccggcacgaaagacgccgtgatgatggtcgaatcggaagcctac
gagctttccgaggccgaaatgctgggcgccgtgaaattcggccatgaccagatgcagccg
gtgatcgacatgatcctcgatctggcgggcgaagcggcgaaagagccgttcgacttccag
tcgccggattattccgacctctacgccaaggttcaggccgccggcgaggaagccatgcgc
gccgccttcgcgatcaccgacaagcaggagcggacggcagccgtctccgccgcccgcgag
acggtgaaagccgcgctcagcgaggaagagctggaggacaagaacctcggctccgcgatg
aagaagctggaaagctcggttgtccgtggcgacatcctgaaaaccggcaagcgcatcgac
ggccgcgacctttccaccgtgcggcccatcgtggccgaagcgggcctcttgccccgcacc
cacggctccgcgctcttcacccgtggtgagacgcagggcctcgtggtcaccacgctgggc
acgggcgacgatgagcagatcatcgatgcgctgcacggcgaaagccgctccaacttcatg
ctgcactacaacttccccccgtattccgtgggtgaagccggccgcatgatgggcccgggc
cgccgcgagatcggccacggcaagctggcatggcgcgcgcttcaggcggtcctgcctgcg
gcgacggatttcccctacacgatccgtgtcgtctccgagatcaccgagtccaacggctcc
tcctcgatggcgtccgtctgcggcggttcgctttccatgatggatgccggtgtgccgctg
aaagcccccgtggccggtgtggcgatgggcctgatcctcgaaggcagcgatttcgccgtg
ctgaccgacatcctcggtgacgaggatcacctcggcgacatggacttcaaggtcgccggt
acggaaaacggcatcacctcgctccagatggacatcaaggttgccggcatcacaccctcg
atcatggagcaggcgctggcacaggccaaggacggccgactgcacatcctgaacgaaatg
ggcaaggcgctggccgaaggccgcaacgagttctcggcccatgccccgcgcatcgagacg
atgaacgtgccgaccgacaagatccgtgaagtcatcggttccggcggcaaggtgatccgc
gagatcgtggaaacctcgggcgccaaggtcgacatcaacgacgacggcgtgatcaagatc
gccagccccaatgccgaggccatcgagaaggcccgcggcatgatccacgccatcgtggcc
gagcccgaagtcggcgagatctacaccggcaaggttgtaaagatcatggattttggtgcc
ttcgtgaacttcttcggcaagcgtgacggcctcgtgcacgtctcccagatgtcgaacgag
cgtgtcggccacccgaaagacgtggtgcaggaaggccaggacgtgaaggtcaagctcatg
ggcttcgacgatcgcggcaaggtccgcctttccatgaaggttgtcgaccaatcgaccggc
aaggaaatcacggaatccgaagaggcgtaa
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