KEGG   Algicella marina: GO499_19540
Entry
GO499_19540       CDS       T08414                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
amaq  Algicella marina
Brite
KEGG Orthology (KO) [BR:amaq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amaq03400]
    GO499_19540
Enzymes [BR:amaq01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     GO499_19540
    5.6.2.6  RNA 3'-5' helicase
     GO499_19540
DNA repair and recombination proteins [BR:amaq03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    GO499_19540
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2
Other DBs
NCBI-ProteinID: QHQ37220
UniProt: A0A6P1T6A4
LinkDB
Position
complement(3976499..3978886)
AA seq 795 aa
MSLPPRFQGWFETRGWQPHPHQLALLARASATSTLLIAPTGGGKTLAGFLPTLVDLAANP
RPGMHTLYISPLKALAADIRRNLETPVAELGLNVRVEDRTGDTAYSQRRRQRTDPPHILL
TTPESLALLLSYEDAPRIFAGLSRVVIDEIHALAESKRGDQLMLCLSRLQSLAPGLARTG
LSATVDDPPALAEYLAPGITEIVHAAPGPKPDIRLLDTDDAPPWAGHGGRFAARAVMEEI
RKAGTTLVFINTRATAELFFQELWSHNEENLPIALHHGSLSREARTRVEHAMVAGELRAI
VCTASLDLGIDWGDVDLVIQVGAPRNVKRLVQRIGRAGHRYNTPSRALLVPANRFEVIEC
RAALEAVMEGDLDRTVQAEGPLDVLCQHILLMACSAPFTADELYEEIVTAGPYRALLRAE
FEEALEFCATGGYALRAYDRWQRLVQREGRWQLRDPRTARALRMNIGTIIGTETLSVRLR
GRGAPLGEVEESFAASLVPGDTFLIGGQTVRYEGLREMTIEVSKQPSRQPKIAVFGGLRM
STSLELSRRVIDILNTPARWADLPAHTADWLNLQRDISALPAPGGLLSEAFLRGDRAFLS
LYSFAGRNANQTLGLLLTRRMEDLGLNPTGFVANDYAVLVWGLTLVKDVRPLLSPDGLRD
GLESWLAENAVMKRTFRASAIIAGLIERNQPGRRKTGRQATFSSDILYDTLRKYDPDHLM
LKITKEEASRGLVDFDRIEEMLSRAPESRHIVAPHVTPFAAPLLLELGKVPIQGSAQDVA
LQEEADRMMQEAGLA
NT seq 2388 nt   +upstreamnt  +downstreamnt
atgagcctgccgccccgctttcagggctggttcgaaacccgtggctggcagccccatccc
caccaactcgcactgttggcccgcgcttccgcaacatccaccctgctcatcgctccgacg
ggtggcggcaagacgctcgcgggctttctacccacgctcgtcgatctggccgccaacccg
cgccctggcatgcacacgctctacatttcacctctgaaggcgctcgccgccgacatccgc
cgcaaccttgaaaccccggttgcggaactcgggcttaacgtccgcgtcgaggatcgcacc
ggcgataccgcctactcgcaacgtcgccgccagcggaccgatccgccgcatatcctgctc
acgacgcccgagtcccttgcgctgctgctttcctatgaggacgcgccacgcattttcgcc
gggctttcccgcgtagtcattgacgaaatccacgcgcttgccgaatcaaaacgcggcgat
cagctcatgctctgcctctcgcgcctgcaaagcctcgcgcccggcctcgcccgcaccggc
ctctccgccacggtggatgatccaccggctctggccgaatacctcgcccccggcatcacc
gaaatcgtgcatgccgccccgggtccaaagcccgatatccgcctgctcgacaccgacgac
gcaccgccatgggcggggcatggcggccgtttcgccgcgcgcgccgtcatggaggagatc
cgcaaagccggcaccaccctcgttttcatcaacacccgcgccaccgccgaactcttcttt
caggaactctggtcccacaacgaagaaaatcttcccatcgcccttcaccacggcagcctc
tcgcgggaggcgcgaaccagggtggaacatgcgatggtcgccggcgagttgcgcgccatc
gtctgcaccgcttcgcttgatctcggcatcgactggggcgatgtcgatctcgtcattcag
gtcggcgcgccaagaaatgtcaaacgcctcgtccagcgtatcggccgcgccggtcaccgt
tacaatacgccatcgcgcgctctccttgtcccggccaatcgcttcgaagtcatcgaatgc
cgcgcggctctggaagcggtgatggagggagatctcgaccgaaccgttcaggccgaaggt
ccgctggatgtcctctgccaacatattctcctgatggcctgttcggcgcctttcacggcg
gatgaactgtacgaagagatcgtcaccgccggtccctaccgcgccctcctgagagcggag
ttcgaggaggcgctggaattctgcgccaccggaggctacgcgctccgcgcctatgatcgc
tggcagcgactggtgcagcgggaaggccggtggcagctgcgcgatccgcgtacagcccgc
gcactgcgcatgaacatcggcacgatcatcggcaccgaaaccctgtccgtccgcctgcgc
ggccgcggtgccccactgggtgaagtcgaagaaagcttcgccgcctcactcgttcccggc
gatacgttcctcattggcggtcagaccgtccgctacgagggcctgcgcgagatgaccatc
gaggtcagcaagcaaccatctcgccaaccgaagatcgccgtcttcggcggcctgcgaatg
tccacatcgctcgaactctccagacgggtcatcgacattctcaacacccccgcccgatgg
gccgatctccccgcccatacggccgactggttgaaccttcagcgggatatctcagccctg
cccgcccccgggggcttgttgtcggaggcgtttctgcgcggcgaccgcgccttcctgtca
ctctattccttcgccggccgcaacgccaaccagaccctcggcctgctcctgacccgccgg
atggaggatcttggcctgaaccccaccggcttcgttgccaatgattacgcggtgcttgtc
tggggcctgacactggtgaaggacgtccgcccgctgctctcgcccgacggcctgcgcgac
ggcctcgaatcttggctggcagaaaatgctgtcatgaaacgcaccttccgcgcctccgcc
atcatcgccgggctgatagaacgcaaccagcccggccgtcgcaagacaggccgacaggcc
acgttttcctccgacatcctctacgacacactgcgaaaatacgatcccgatcacctgatg
ctgaagatcacgaaagaggaagcgtcgcgcgggttggtggacttcgaccggatagaggaa
atgctttcccgcgccccggaatcacgccatatcgtcgccccgcacgtcacgcccttcgcc
gccccacttctgctcgaattgggcaaagtgccgattcagggctctgcacaagatgtagcg
ttgcaagaagaggctgatcgcatgatgcaggaggccggtctggcgtga

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