Malaciobacter marinus: AMRN_0573
Help
Entry
AMRN_0573 CDS
T06187
Symbol
groEL
Name
(GenBank) 60 kD chaperonin (cpn60)
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
amar
Malaciobacter marinus
Pathway
amar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMRN_0573 (groEL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amar03019
]
AMRN_0573 (groEL)
03110 Chaperones and folding catalysts [BR:
amar03110
]
AMRN_0573 (groEL)
03029 Mitochondrial biogenesis [BR:
amar03029
]
AMRN_0573 (groEL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amar04147
]
AMRN_0573 (groEL)
Enzymes [BR:
amar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AMRN_0573 (groEL)
Messenger RNA biogenesis [BR:
amar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AMRN_0573 (groEL)
Chaperones and folding catalysts [BR:
amar03110
]
Heat shock proteins
HSP60 / Chaperonin
AMRN_0573 (groEL)
Mitochondrial biogenesis [BR:
amar03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AMRN_0573 (groEL)
Exosome [BR:
amar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AMRN_0573 (groEL)
Exosomal proteins of other body fluids (saliva and urine)
AMRN_0573 (groEL)
Exosomal proteins of breast cancer cells
AMRN_0573 (groEL)
Exosomal proteins of colorectal cancer cells
AMRN_0573 (groEL)
Exosomal proteins of bladder cancer cells
AMRN_0573 (groEL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AXX86340
UniProt:
A0A347TIB2
LinkDB
All DBs
Position
578604..580238
Genome browser
AA seq
544 aa
AA seq
DB search
MAKEVMFSDNARNRLFSGVEKLADAVKVTMGPRGRNVLLQKSFGAPNITKDGVSVAREIE
LEDTIENMGVQLVKEVASKTADEAGDGTTTATVLAYSIFKEGLRNVTAGANPIILKRGMA
KASEAILEEIKKASKEVANKTEIEQVASISANSDMAIGSMIAEAMDKVGKDGVITVEEAK
GIYDELDVVEGMQFDRGYLSPYFVTNSEKMIAEMENPYILLYDKKISNLKEMLPILEAVN
QAGRPLLIIAEDVDGEALATLVVNRLRGSLNIAAVKAPGFGDRRKAMLEDIAVLTGGTVI
SEEMGMSLDATGIDSLGTASRIVIDKDNTTIVNGSGSAEAVQSRVGQIKNEIANTTSDYD
KEKLQERLAKLSGGVAVIKVGAATETEMKEKKDRVDDALSATRAAVEEGIVIGGGAALIK
AAAKVSLELEGDEQIGADIVLRAISAPLKQIATNAGFDAGVVVNEVKKSDSDNYGFDAAT
GNYVDMFEAGIVDPAKVERVAMQNAVSVASLLLTTEATVTDIKEDKAAPAMPDMGGMGGM
PGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagaagtaatgtttagtgataatgcaagaaacagattattttcaggtgtagaa
aaattagctgacgctgtaaaggttacaatgggacctagaggaagaaatgttttattacaa
aaatcttttggagctcctaatatcactaaagatggagtatctgttgcaagagagattgaa
ttagaagatactatagaaaatatgggagttcaacttgtaaaagaagttgcttctaaaaca
gctgatgaagcaggtgatggtacaactactgcaacagtattagcttattctatatttaaa
gaaggtcttagaaatgttactgctggggctaatcctattatcttaaaaagaggaatggca
aaagcatcagaagcaattttagaagagataaaaaaagcttcaaaagaagttgcaaataaa
acagaaattgaacaagttgcatcaatctcagcaaactctgatatggcaattggttctatg
attgcagaagctatggacaaagttggaaaagatggagttattactgttgaagaagcaaaa
ggtatttatgatgaattagatgttgttgagggtatgcagtttgatagaggatatttatct
ccatactttgtaactaattctgaaaaaatgattgcagaaatggaaaatccatatatttta
ctatatgataaaaaaatatctaatttaaaagagatgttaccaatcttagaagctgttaat
caagcaggaagaccattattaattattgcagaagatgttgatggtgaagcattagcaaca
ctagttgtaaatagattaagaggttctttaaatattgctgctgttaaagctccaggattt
ggtgatagaagaaaagcaatgcttgaagatattgctgtgttaactggtggtactgttatt
tctgaagagatgggaatgagtttagatgctactggaattgattctcttggaactgcttca
agaattgtaattgataaagataatacaactattgtaaatggttcaggaagtgcagaagct
gttcaatcaagagttggacaaataaaaaatgaaatcgcaaacactacaagtgattatgat
aaagaaaaattacaagaaagacttgcaaaactttctggtggggttgcagtaattaaagtt
ggtgctgctactgaaactgaaatgaaagagaaaaaagatagagttgatgatgcattaagt
gcaacaagagctgctgttgaagaaggtattgtaattggtggtggagctgcattaattaaa
gcagctgcaaaagtatctttagagcttgaaggtgatgagcaaattggtgcagatattgtt
ttaagagctatttcagctccattaaaacaaattgcaacaaatgctggatttgatgcaggt
gttgtggtaaatgaagtaaaaaaatctgatagtgataattatggatttgatgctgcaact
ggaaactatgttgatatgtttgaagctggaattgtagatcctgctaaagttgaaagagtt
gcaatgcaaaatgcagtatcagttgcatcacttcttttaacaacagaagctacagttaca
gatattaaagaagataaagcagctccagctatgcctgatatgggtggaatgggtggaatg
cctggtatgatgtaa
DBGET
integrated database retrieval system
