Malaciobacter marinus: AMRN_1183
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Entry
AMRN_1183 CDS
T06187
Symbol
sbcD
Name
(GenBank) DNA repair exonuclease SbcCD, nuclease subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
amar
Malaciobacter marinus
Brite
KEGG Orthology (KO) [BR:
amar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amar03400
]
AMRN_1183 (sbcD)
DNA repair and recombination proteins [BR:
amar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMRN_1183 (sbcD)
Archaeal homologous recombinant proteins
AMRN_1183 (sbcD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
FBPase_2
Metallophos_2
IspD
DUF5638
Motif
Other DBs
NCBI-ProteinID:
AXX86926
UniProt:
A0A347TJZ8
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Position
1175255..1176445
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AA seq
396 aa
AA seq
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MRFLHTSDWHLGQNFMGKSRIEEHEAFLSWLLNTIKENNIDVLLVSGDIFDTGTPPNYAL
ELYYNFLKQLSSINSLNTTIITAGNHDSVSTLKAPKQLLEALNVHVVVNGDEDENIIIPI
KEGDTTKSIVCAVPFLRDSVIRQSLGGETVSDKEKLANNGIKAYYEKAYKKAKEISKNSP
IIATGHLTTVGGRTSESERDIYIGGTLDIGGDYLASMFDYVALGHLHINQTVGNEHVRYS
GSPIPLSFSESKNTQKVNIVTIEEDVKVEELEIPLKRKLQVIKGDLETIKKELKAIEDKS
TWIEVHIKDDNPMFANTEIRELATKLELTILAVKIEKSEKQLRAKELKAISLDELSVQEV
FEKRLELEEIENKEFKEQLSQTFNEVVSNLHESEQI
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
ttgagatttttacacacatcagattggcacttaggtcaaaattttatgggcaaaagcaga
attgaagagcatgaagcttttctatcttggcttttaaatacaataaaagaaaataatata
gatgtattacttgtatcgggagatatatttgatacaggaacaccaccaaactatgcactt
gaactttactataactttttaaaacaattatcaagcataaatagtttaaatactacaatt
ataacagctggaaatcatgactctgtttccactttgaaagcaccaaagcaactacttgaa
gcactaaatgtgcatgtagtagtaaatggtgatgaagatgaaaatataatcatacctata
aaagagggcgatactactaaatcgatagtttgtgccgtaccatttttaagagatagtgtt
atcagacaatcacttggtggggaaactgtaagcgacaaagaaaaacttgcaaacaatggt
atcaaagcttattatgaaaaagcctacaaaaaagcaaaagagataagcaaaaactctcca
atcatagctacgggacacttgacaactgtaggcggtcgtacaagtgaaagcgaaagagat
atttacataggtggaacacttgatattggtggggattatttagctagtatgtttgactat
gtggctttgggacacttacatatcaatcaaacagtaggaaacgaacatgtaagatactca
ggttctccaatacctctaagtttttcagagtctaaaaacacgcaaaaagtaaatatagta
actatagaagaagatgtaaaagtagaagaattagaaatccctttaaaaagaaagcttcaa
gttatcaaaggtgatttggaaactataaaaaaagagttaaaagctatcgaagataaatct
acttggatagaagttcatataaaagatgacaacccaatgtttgcaaatactgagataaga
gaactagccacaaaactagaactaacaatcctagcagtgaaaatagaaaaaagcgaaaag
cagttaagagcaaaagagttaaaagctataagcctagatgaactaagtgttcaagaggtt
tttgaaaaaagattagaactagaagagatagaaaacaaagagtttaaagagcagttatct
caaacttttaatgaagtagtttcaaatcttcatgaaagtgagcaaatctaa
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