Malaciobacter marinus: AMRN_1184
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Entry
AMRN_1184 CDS
T06187
Symbol
sbcC
Name
(GenBank) DNA repair exonuclease SbcCD, ATPase subunit
KO
K03546
DNA repair protein SbcC/Rad50
Organism
amar
Malaciobacter marinus
Brite
KEGG Orthology (KO) [BR:
amar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amar03400
]
AMRN_1184 (sbcC)
DNA repair and recombination proteins [BR:
amar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AMRN_1184 (sbcC)
Archaeal homologous recombinant proteins
AMRN_1184 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
BLOC1_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AXX86927
UniProt:
A0A347TJZ9
LinkDB
All DBs
Position
1176445..1179615
Genome browser
AA seq
1056 aa
AA seq
DB search
MKILKVRLQNINSLKGEFEIDFQEFLKDESLFAITGPTGAGKSTILDVITCALYGRTARL
TNPNDLMSRHTGECLCEVEFEIKGKVYRSSWAQKRARKNPNGNFQSAKMEIVELETNKIL
ESYLSKVPKVVEEISGLDFDRFVQSMMLAQGSFDAFLKAKENERSNLLEKITGTYIYKQI
SQSIYETYSSKKKEIEADEIALGSIELLEPNIVEEKTKQLETNKKEKQELDKNETELKKL
SNYLETLDKLEADSQKYNQEFEQISKEKEDNKEQFTKLELANKAIRIQALNQEKNQLTNT
ISNDKQTLESLQKEDKELKEQIQTKEQEFKLSKQSLEKEQITYNENYKKLKELRTIKTQS
DGKNQLYKQICQKISQHLQELANHFEIAFETLLSDETQIDNLYKNFSSNLDTKKEQLDTL
IEQYKAIETQTKDINQKEQNTRVKLKEIETLLKALSDYETLQEQITQEQNKIKEYNTEIE
TQTKLNQEKTKLINQINETLNSLKQTREKELLIKNYEQDRAKLKDGQECFLCGSKEHPYI
NHSLNIDTEISQTLAKIKEQESYLQEQNSELNKAQINLAKLSSKLESSNLEIQKQQTTKE
QIEEYFKTNDFKLQEDSKATLQEQMQFCENELKEYVTLREQKESLQAKKESLQTSVNKEL
QKQQQINTSINTIKELKEEQSKLKEEITKLQTQSKSILDIEDLDLFEKNIQESLDTVSKH
FNSLQNHLSSLKSKDESLSKQIIQLNKKQEDDKQNLVHIKEKFEKALVEYGFNSQEEFEK
ANLAKEEFETLTNLCKTIEEKYTQIQTLKTDTNKKLKEHKLLEKEINPTNQNKDDTNKEL
QKLQSTIDQLQETIGSISKELEINTQNIKKSEDKIKQLEKKKQAFQVWVKLNDMIGSSQG
DKFAKFAQGITLDQLIYLANKHLEILSPRYELQRNTESNKLLDIEIIDGFQGDAVRGVNT
LSGGESFIVSLSLALGLSSLASQKISIDSLFLDEGFGTLDSDSLELALNALNQLQSSGKM
VGVISHVEALKERIPLQIKVEPKGDGTSGLDLNNLI
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgaagatactaaaagtaagactacaaaatataaactccctaaaaggtgagtttgaaata
gattttcaagagtttctaaaagatgaatctctttttgccataacaggaccaacaggagca
gggaaaagtacaattcttgatgtaatcacttgtgctttatatggaagaacagccagatta
acaaacccaaatgacttgatgagtagacacacaggtgagtgtttatgtgaagtggaattt
gaaatcaaaggcaaagtctatagaagttcttgggctcaaaaaagagcaagaaaaaaccca
aatgggaacttccaatctgcaaagatggagatagtagaactagaaacaaacaaaatacta
gaatcatacctttcaaaagtaccaaaagtagtagaagagatatcagggcttgattttgat
agatttgttcaatctatgatgttagcccaaggaagttttgatgcctttttaaaagccaaa
gaaaatgagcgttctaatctactagaaaagattactggaacatatatctacaaacaaatc
tcacaaagtatctatgaaacatactcgtcaaagaaaaaagagatagaagctgatgaaata
gcactaggaagtatagaactactagagccaaacatagtagaagaaaaaacaaaacaacta
gaaacaaataaaaaagaaaaacaagaactagataaaaatgaaaccgaactaaaaaaacta
tcaaactatctagaaactcttgataaactagaagcagatagccaaaaatacaaccaagag
tttgaacaaataagcaaagaaaaagaagacaacaaagagcagtttacaaagctagaacta
gcaaacaaagccataagaatacaagctttgaaccaagagaaaaaccaactaacaaacaca
atctcaaatgataaacaaaccctagagtctttgcaaaaagaggataaagagttaaaagaa
caaatccaaacaaaagagcaagagtttaaactctcaaaacaaagccttgaaaaagagcaa
ataacatacaatgaaaactataaaaaactaaaagagttaagaactataaaaacacaaagt
gatggtaaaaaccaactttataagcaaatatgtcaaaaaatctcacaacacctacaagag
ttagcaaatcattttgagatagcttttgaaacacttctaagtgacgaaacacaaatagac
aatctatacaaaaacttctcatcaaatctagacacaaaaaaagagcagttagatactcta
atagaacaatacaaagcaatagaaacccaaacaaaagatataaaccaaaaagagcaaaac
acaagagtcaaactaaaagagatagaaacacttctaaaagccctaagtgattatgaaaca
ctacaagagcaaatcacacaagagcaaaacaagataaaagaatacaacactgagattgaa
acacaaacaaaactaaaccaagagaaaacaaaactaataaaccaaataaacgaaactcta
aactcactaaaacaaacaagagaaaaagagcttcttatcaaaaactacgagcaagataga
gccaaactaaaagatgggcaagagtgctttttatgtggttcaaaagagcatccatatata
aaccactctttaaatatagatacagagataagtcaaacactagctaaaataaaagagcaa
gaaagctatctacaagagcaaaacagcgaactaaacaaggctcaaataaacctagcaaaa
cttagctcaaaacttgaaagctcaaacctagaaatacaaaaacaacaaactacaaaagag
caaatagaagagtacttcaaaacaaacgatttcaaactacaagaagactcaaaagccaca
ctacaagagcaaatgcaattttgcgaaaatgagttaaaagagtatgtaactttaagagag
caaaaagagtctttacaagcaaaaaaagagtctctacaaacatctgtaaacaaagagcta
caaaaacaacagcagataaacacaagcataaacactataaaagagttaaaagaggaacaa
tcaaaactaaaagaagagataacaaagcttcaaacccaaagcaaaagtatcttagatata
gaagatttagacctttttgaaaaaaatatccaagagagtttagacactgtttcaaaacac
tttaacagtttgcaaaaccatctttcaagcctaaaatcaaaagatgaatccctatcaaaa
cagataatccaattaaacaaaaaacaagaagatgataaacaaaacctagtacacataaaa
gagaagtttgagaaagctttagtagagtatggcttcaactcacaagaggagtttgaaaaa
gcaaacttagcaaaagaagagtttgaaaccctaacaaacctatgcaaaaccatagaagag
aaatatacacaaatacaaactctaaaaacagacacaaacaaaaaactaaaggaacacaaa
ctcttagaaaaagagataaacccaacaaatcaaaacaaagatgatacaaacaaagagtta
caaaaactacaaagcacaatagaccaactacaagaaaccataggaagcatctcaaaagag
ttagagataaatacccaaaatataaaaaaatcagaagacaaaataaaacaacttgaaaag
aaaaaacaagccttccaagtatgggtaaaactaaacgatatgataggctcaagccaaggg
gacaagttcgccaaatttgcccaaggtatcaccctagaccaactaatctacctagcaaac
aaacacctagaaatcttaagcccaagatatgaacttcaaagaaatacagaatcaaacaaa
ctcttagatatagagataattgacggcttccaaggagacgcagtccgaggtgtaaataca
ctctcagggggagaaagcttcatagtaagtctatctttagctttaggactttcaagtcta
gcaagccaaaagataagtatagactcacttttcctagatgaagggtttggaacactagat
agcgatagcctagaactagcactaaatgcactaaatcaattacaaagctcaggaaaaatg
gtaggtgtgatttcccatgtggaagcactaaaagagcgaattccattgcagataaaggtt
gagcctaagggtgatgggacgagtggtttggatttgaataatttaatataa
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