Malaciobacter marinus: AMRN_1381
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Entry
AMRN_1381 CDS
T06187
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
amar
Malaciobacter marinus
Pathway
amar03030
DNA replication
amar03430
Mismatch repair
amar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMRN_1381 (holB)
03430 Mismatch repair
AMRN_1381 (holB)
03440 Homologous recombination
AMRN_1381 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amar03032
]
AMRN_1381 (holB)
03400 DNA repair and recombination proteins [BR:
amar03400
]
AMRN_1381 (holB)
Enzymes [BR:
amar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMRN_1381 (holB)
DNA replication proteins [BR:
amar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMRN_1381 (holB)
DNA repair and recombination proteins [BR:
amar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMRN_1381 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
IQUB
IL10
Pox_VLTF3
Motif
Other DBs
NCBI-ProteinID:
AXX87117
UniProt:
A0A347TKI9
LinkDB
All DBs
Position
complement(1385050..1385688)
Genome browser
AA seq
212 aa
AA seq
DB search
MTNINDIKVDSSTILIVNSIEDTLSYLLSTLPTHSARVIKNEQKDEFLLAQANAAVKEAY
IATNSKKYLILCGTTFRSEAQNSLLKVLEEPPKNIVFIIVTTTKSTILPTIFSRMPHKYL
KKSQNLNSSKLDLLRLDLKDIYNFLKENQKISKNEAISIVESMLFKVKEQNINLTQKELD
MFSNAIKLINLNSRPINVLTTLLLTINNRKRF
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatataaacgatataaaagtggattcatcaactatattaatagtaaatagtata
gaagatactctttcatatcttttatcaactttgccaacgcattcagctagagttataaaa
aatgaacaaaaagatgagtttttattagctcaagcaaatgcagctgtaaaagaagcttat
attgctacaaatagtaaaaaatatcttatattatgtggtacaacatttagaagtgaagct
caaaactctttattaaaggtattagaagaaccaccaaaaaatattgtttttattattgtg
acaacaacaaagtcaacaatattaccaacaattttttcaagaatgccccataaatattta
aaaaaatcacaaaatttaaattcatctaaattggatttattaagacttgatttaaaagat
atttataattttttaaaagagaatcaaaaaatctcaaaaaatgaagctatttcaatagtt
gaatcaatgctttttaaagtaaaagaacaaaatataaacttaacacaaaaagagcttgat
atgttttcaaatgcaattaaattaattaatttaaattcacgtcctataaatgtattaaca
actttgcttttaacaataaataatagaaaaagattttaa
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