KEGG   Malaciobacter marinus: AMRN_1397
Entry
AMRN_1397         CDS       T06187                                 
Symbol
tssH
Name
(GenBank) type VI secretion system, ClpV1 family ATPase TssH
  KO
K11907  type VI secretion system protein VasG
Organism
amar  Malaciobacter marinus
Pathway
amar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:amar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AMRN_1397 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:amar02044]
    AMRN_1397 (tssH)
Secretion system [BR:amar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AMRN_1397 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 AAA_16 ClpB_D2-small AAA_22 AAA_7 TniB Sigma54_activat NBD_SMAX1 RuvB_N AAA_30 IstB_IS21 NACHT nSTAND3 AAA_19 AAA_29 Zeta_toxin SRP1_TIP1 Mg_chelatase ABC_tran
Other DBs
NCBI-ProteinID: AXX87133
UniProt: A0A347TKK5
LinkDB
Position
1400063..1402603
AA seq 846 aa
MKLELKNLINNLDKQTKKYLENSAQRCIVRGGSEILIEDILYVFLEDENSIFSLMLNQYR
IDKNELIKVIQKEVKISISESNSPIFSTILVNWLEDSYSYAKLILNQNEITQSSMILSLF
ENSIKYSNTKYFKIFEEIDVEELKSLIEGLNEKPIENKTSNENSNTKSEIEKYTTDLTQL
AKENRIDPVLCRDDEIKQAIDILLRRRKNNPILVGEAGVGKTAVVEGLALKIVNNEVPVQ
LKEAKILSLDVGALQAGASVKGEFERRLQEVINKLKASSEFVILFIDEAHTLIGAGGNEG
GSDAANLLKPALARGELKTIAATTWLEYRKYFEKDPALSRRFQKINLLEPTVTEATTILR
GIAKKYEEAHDVYIEDDAIKSASSLSARYITGRQLPDKAIDVLDTACANVKISQSNIPFE
LQKIATKILEKEREIEFLQRDDVNKIKNNKEKIKILKNELKVYEDEEKLIRTNWEKQKEV
LEQIGECKDKKEKSKLKTQLKTLQKNNMYIFNTVNKEQVAKVISSWTGIPLGNMVEEQIK
TVVELEDKIKDKVIGQEQAISYLNRFLQISISGLKKEDSPTGVFLLVGPSGVGKTETAKA
IAQLMYGGERFITTINMTEFQEKHTVSRLIGSPPGYVGYGDGGQLTDPVRVKPYSVILLD
EIEKAHPDILNLFYQIFDKGEVNDGEGRVIDFKNTTIIMTSNLATKEITNYCQNNKDNIS
LEELSSLITPVLSDYLKPALLGRMNVIPYFNLNEEALIKITKQKFEITKKQLLKKEIDLE
IDENLIKYIVSLSNSIDTGARNIDLIINTKIMPKLSKYLLDSSINKKKIKNISLNLDSKS
NEILIK
NT seq 2541 nt   +upstreamnt  +downstreamnt
atgaaattagaattaaaaaatttgataaataatttagataagcaaacaaaaaaatatctt
gaaaactcagcacaaagatgtattgtaagaggtggaagtgaaattttaatagaagatatt
ttatatgtttttttagaagatgaaaatagcatattttctttgatgttaaatcaatacaga
attgataaaaatgagttaataaaagtaattcaaaaagaagtaaaaataagtataagtgaa
tcaaacagccctatattctctactattttagttaattggcttgaagattcttattcttat
gcaaagcttattttaaatcaaaatgaaataacgcaatcttcaatgattttatctttattt
gaaaatagtattaaatattcaaatacaaaatactttaaaatatttgaagaaattgatgta
gaagagctaaaatccttaatagagggattaaatgagaaaccaattgaaaataagacttct
aatgaaaactcaaatacaaaaagtgaaatagaaaagtatacaacagatttaacccaatta
gcaaaagaaaatagaattgatcctgtattatgtagagatgatgagataaaacaagcaatt
gatattttgttaagaagaagaaaaaataatcctattttagttggtgaggcaggtgttgga
aaaactgcagtagttgaagggctagctttaaaaattgttaataatgaagttcctgttcaa
ttaaaagaagcaaaaatattatctttagatgttggtgctttacaagctggagcaagtgta
aaaggagagtttgagagaagattgcaagaggtaattaataaattaaaagcaagtagtgaa
tttgtaattttatttattgatgaagctcatacactaataggagcagggggaaatgaaggt
ggttcagatgctgcaaatttattaaaacctgcactagcaagaggagaactcaaaacaatt
gctgcaactacatggttagaatatagaaaatattttgaaaaagatcccgctttatcaaga
agatttcaaaaaatcaatcttttagaaccaacagtaactgaagctacaacaattttaaga
ggaattgctaaaaaatatgaagaagcacatgatgtttatattgaagatgatgcaataaaa
agtgcttcatctttatctgctagatatataacaggtagacaacttcctgataaagcaatt
gatgttttagatactgcttgtgcaaatgtaaaaattagtcaatcaaatataccttttgaa
ttacaaaaaattgctacaaagatattagaaaaagaaagagaaatagagttcttacaaaga
gatgatgtaaacaaaataaaaaataacaaagaaaaaattaagattttaaaaaatgagctt
aaagtctatgaagatgaagaaaaactcattagaacaaactgggaaaaacaaaaagaagtt
ttagaacaaattggagaatgcaaagataaaaaagagaaaagtaaactaaaaacccaactt
aaaactttacaaaaaaacaatatgtatatttttaatactgttaataaagaacaagtagca
aaagttatatcttcatggacaggaattcctttggggaatatggttgaagagcaaataaaa
acagttgttgaacttgaagataaaattaaagacaaagttataggtcaagaacaagcaata
tcatatttaaataggtttttgcaaatttcaatttctggattgaaaaaagaagactctcct
actggtgtatttttacttgtaggacctagtggagttggtaaaacagaaacagcaaaagca
atagctcaacttatgtatggtggtgaaaggtttatcactactataaatatgacagagttt
caagaaaagcatacagtttcaagacttataggatcacctcctggttatgttgggtatggt
gatggaggtcaactaactgatcctgttagagtaaaaccatattcagttatattgctagat
gaaatagaaaaagctcatcctgatattttaaatcttttctatcaaatttttgacaaagga
gaagtaaatgatggagaaggaagagtaattgattttaaaaatactaccataattatgact
tctaatttagcaactaaagaaataacaaattattgtcaaaataataaagataatatttca
ttagaagagctttcatcacttattacacctgtgcttagtgattatttaaaacctgcatta
cttggaagaatgaatgtgattccgtattttaatttaaatgaagaggctttaatcaaaatt
acaaaacaaaaatttgaaataactaaaaaacaattacttaaaaaagaaatcgatttagaa
attgatgaaaaccttatcaaatatatagttagtttatcaaacagtattgatacaggtgct
agaaatattgatttgataattaatacaaaaattatgccaaagttatctaaatatttattg
gattcgtctataaataaaaagaaaataaaaaatatctctttaaatctagattcaaagagt
aatgaaatattgattaaataa

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