Malaciobacter marinus: AMRN_1434
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Entry
AMRN_1434 CDS
T06187
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
amar
Malaciobacter marinus
Pathway
amar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMRN_1434 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amar03019
]
AMRN_1434 (pnp)
03016 Transfer RNA biogenesis [BR:
amar03016
]
AMRN_1434 (pnp)
Enzymes [BR:
amar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
AMRN_1434 (pnp)
Messenger RNA biogenesis [BR:
amar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
AMRN_1434 (pnp)
Transfer RNA biogenesis [BR:
amar03016
]
Prokaryotic type
tRNA degradation factors
AMRN_1434 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
KH_2
S1_2
CTD9
Hjc
Motif
Other DBs
NCBI-ProteinID:
AXX87170
UniProt:
A0A347TKP2
LinkDB
All DBs
Position
complement(1435789..1437969)
Genome browser
AA seq
726 aa
AA seq
DB search
MSTVCEFELNGKDEIFEFDKVAKQANGSVLARLGNAVVLATVVSEFDNPVEEDFTPLTVQ
YVEKTYAAAKLPGGFIKREAKPSEFETLTSRVIDRSLRPLFPKGYVYPTTITVIVLSADK
DVDLQALGLNAASAALYTSNLPIKKSIAGVRIGKVNNEYIVNPTSDQMTESTLDLYVAGS
KEELLMIEMKSISSEEMVEVDIEAFTKIHKTNEVNEDNLVEAIEIAQNVLKEVNTTYENG
FETVCKEQKNVELIEFTIDEAIINNVRNNYNTNVNDAIKKLAKSERAVELKELAKHILEK
EYKENENINLAQVYEAVSIVKKEIVRKMIVEDKVRADGRGLKDVRPISIETNILPSTHSS
CLFTRGETQALVIGTIAGPKDGQMYEILTNKSTSMENFMVHYNFPGFSVGEAKPMFGVGR
RELGHGNLGKKALEATIDKDFNETIRLVSEILESNGSSSMATVCGGSLALKAAGIPISGL
VAGVAMGMVVEDEKYSVLTDIMGLEDHDGDMDFKVAGTSEGITALQMDIKLGGIELNVLK
EALLQAKEGRLHILNLMEEAAKEIVPSDALPLVEQFAIDPSKIMVVIGKAGSTIKEIIEK
FSVSIDLDRDSGNVKVSGEDKQNVLDACEHIKTISNNATSRKESGKNIDFGKLYTPEEVL
EGKVERITDFGAFISLPKGGEGLLHISKISKERVKNVSDVLSVGEEVKIKVLNVKKDRIE
LASTLL
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacagtgtgtgagtttgaattaaatggaaaagatgaaatatttgaatttgataaa
gtagcaaagcaagctaatggatcagtattagcaagattggggaatgcagttgtattagca
acagtagtaagtgaatttgataatccagtagaagaggattttactccattgactgttcaa
tatgtagaaaaaacatatgctgctgctaagcttccaggtggatttataaaaagagaagca
aaaccaagtgaatttgaaactttaacttcacgagtaattgatagaagtttaagaccactt
ttcccaaaaggatatgtatatcctacaacaattactgttattgttctaagtgcagataaa
gatgttgatttacaagcattaggtttaaatgcagctagtgcagctttatatacttcaaat
ttacctattaaaaaatctattgcaggtgtaagaattggaaaagttaataatgaatatata
gttaatcctacttctgatcaaatgacagaatctacactagatttatatgtagctggttct
aaagaagaattactaatgattgaaatgaaatcaatttcaagtgaagagatggttgaagta
gatatcgaagcttttacaaaaattcataaaacaaatgaagtgaatgaagataatcttgta
gaagcaatagaaattgcacaaaatgtattaaaagaagttaatacaacttatgaaaatgga
tttgaaacagtttgtaaagaacaaaaaaatgttgaacttattgagtttactattgatgaa
gcaataattaataatgtaagaaacaattataatacaaatgtaaatgatgctattaagaaa
cttgcaaagagtgaaagagctgtagaattaaaagaacttgcaaaacatattttagaaaaa
gagtataaagaaaatgaaaatataaatcttgctcaagtttatgaagcagtttcaattgta
aaaaaagagatagtaagaaaaatgattgttgaagacaaagttagagctgatggaagaggg
cttaaagatgtaagacctatttctatagagactaatatacttccttcaactcactcttct
tgtttatttacaagaggtgaaactcaagccttggttataggaacaattgcaggacctaaa
gatgggcaaatgtatgaaattttaacaaataaatctacatctatggaaaactttatggta
cattataattttccaggcttttcagttggtgaagcaaaacctatgtttggtgtaggtaga
agagaattgggtcatgggaatcttggtaaaaaagctttagaagctacaattgataaagat
tttaatgaaacaataagattagtatctgaaatacttgagtcaaatggttcttcttctatg
gctactgtttgtggtggttctttggcacttaaagcagctggtattccaatttcaggttta
gttgctggtgttgcaatgggaatggtagtagaagatgaaaaatattcagttttaactgat
attatgggtcttgaagatcatgatggagatatggactttaaagtagcagggacaagtgaa
ggtattacagcacttcaaatggatattaaattaggtggaatagaacttaatgtattaaaa
gaagcattacttcaagcaaaagaaggaagattacatattttaaatcttatggaagaagct
gcaaaagagattgttccaagtgatgccttaccattagttgaacaattcgcaattgatcca
agtaaaataatggttgtaattggaaaagctggttcaactataaaagaaataattgaaaaa
ttctctgtttcaattgacttagatagagatagcggaaatgtaaaagtaagtggagaggat
aaacagaatgtacttgatgcttgtgagcatataaaaacaatttcaaataatgcaacttca
agaaaagaaagtggcaaaaatattgattttggtaagctttatacaccagaagaagtatta
gaaggtaaagttgagagaattacagattttggtgcatttatatctttaccaaaaggcgga
gaaggtctactacacatatctaagatctcaaaagagagagttaaaaatgtatctgatgtt
ttaagtgtaggagaagaagtaaaaattaaagtattaaatgtgaagaaagatagaatagaa
ttagcttcaacactattgtaa
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