Malaciobacter marinus: AMRN_2415
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Entry
AMRN_2415 CDS
T06187
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
amar
Malaciobacter marinus
Pathway
amar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AMRN_2415 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amar03019
]
AMRN_2415 (recQ)
03400 DNA repair and recombination proteins [BR:
amar03400
]
AMRN_2415 (recQ)
Enzymes [BR:
amar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AMRN_2415 (recQ)
Messenger RNA biogenesis [BR:
amar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AMRN_2415 (recQ)
DNA repair and recombination proteins [BR:
amar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AMRN_2415 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
SWI2_SNF2
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
AXX88117
UniProt:
A0A347TND9
LinkDB
All DBs
Position
complement(2476323..2478431)
Genome browser
AA seq
702 aa
AA seq
DB search
MNNKHKILKDIFGHEYFRSFQEEVVDSIIQKKDVLTILPTGGGKSLCYQLPTLLMDGVTV
VISPLIALMQDQIKALNDLNIKAEMISSSQTNDENSFTMQKLLEGKLKFIYVAPERFTSN
EFVGVLQRININYFVIDEAHCVSAWGHEFRAEYRNLDKLKRFFPDTCIAAFTATATKKVE
ADIASSLKLNDAKHFRAKTHRNNLDIKVEPRITNGRKQILNFLKTHKGLCGIIYTFTRKE
AESTAQFLCENGYSSKAYHAGLNPSIKDEVYDDFVYEKIDIVVATIAFGMGIDKSNIRFV
IHTSLPKTLENYYQEIGRAGRDGDMSYVYLLYSKADEVKRKIQIEDAIDTGYKQTGLDKL
EAMYRYCVSNNCRHKIIASYFEDEIDDCKTLCDNCTKGEIEQVDVSVDAQKFLSAVYRSE
QRFGTNHIIDILRGSKNQKLLEFGHDRLNVYGLGSDKSKNEWIAIADKLIDIKAVNLGEF
RVLKISGLGMQILKGKEKLLIDSDKLGIAQKFEEENTQLSFDEKLYEKFKSLRRELAQEH
EVPAYVIFGDKTLKELASKLPLTKEDMLDINGVGLVKYEKYGKNFLSLCKSIKEEFGEKL
EDKIPLKKLTKTYLETFELIQDEKTVEEISQIRDLAITSILSHISLLFEHGKISKEKKAQ
LLEPLTIPSEIQRWIQTGLEHESLKELRKYLYLYEYLNKENN
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaacacaaaatactaaaagatatatttggtcatgaatactttagaagtttc
caagaagaagttgtagatagtattatccaaaaaaaagatgttttaactatcttgccaact
ggtggcggtaagtcactttgctatcaattaccaactttgcttatggatggagtaacagta
gtaatctctccacttattgcacttatgcaagaccaaataaaagcactaaatgatttaaat
ataaaagcagagatgataagctcttctcaaacaaatgatgaaaatagttttacaatgcaa
aagcttttagaaggtaaactaaaatttatctatgtagcacctgaaagatttacttcaaat
gagtttgtaggagtattacagcgaatcaatattaactattttgttatagatgaagcccat
tgtgtaagtgcttggggacatgagtttagagcagagtatagaaatcttgataagctaaaa
agatttttcccagatacttgtattgctgcatttactgcaactgcaactaaaaaagtagaa
gctgatattgcttcaagtttaaaactcaatgatgctaaacattttcgtgctaaaacacat
agaaacaatcttgatataaaagtagaaccacgaattacaaatggtagaaagcaaatacta
aattttcttaaaactcacaaaggcttatgtggaattatttatacttttacaagaaaagaa
gcagaatcaacagcgcagtttttgtgtgaaaatggctactcttcaaaggcatatcatgct
ggattaaacccaagtattaaagatgaggtttatgatgattttgtatatgaaaagattgat
attgtagtagctactattgcttttggtatgggtattgataagtcaaatattagatttgta
atacatacaagtttacctaaaaccttagagaactattatcaagaaataggtcgtgcaggt
cgtgatggtgatatgtcttatgtttatttactttattcaaaagctgatgaggtaaaaaga
aaaatacaaatagaagatgcaattgatacaggctataaacaaactggacttgataaactt
gaagctatgtatagatattgtgtatcaaataattgtcgccataagattattgcttcttat
tttgaagatgagattgatgattgtaaaactttgtgtgataactgtacaaaaggtgagatt
gaacaagttgatgtaagtgttgatgcacaaaagtttttaagtgcagtttatagaagcgaa
cagcgttttggaacaaatcatattattgatattttaagaggctcaaaaaatcaaaaactt
cttgagtttggacatgacagactaaatgtttatggcttgggaagtgataaaagtaaaaat
gaatggatagcaattgctgataaactaatagatataaaagcagttaacttaggtgaattt
agagtcttaaaaataagtggtttaggaatgcaaatccttaaaggcaaagaaaaacttcta
atagatagtgataagttaggtattgcccaaaaatttgaagaagagaatacacagttaagt
tttgatgaaaagttatatgaaaagtttaaaagcttaagaagagagttagcacaagagcat
gaagtaccagcttatgttatatttggagataaaactttaaaagagttagcttcaaaacta
cctcttacaaaagaagatatgcttgatataaatggcgttggtcttgtaaaatatgaaaaa
tatggcaagaattttttaagcttatgtaaaagtataaaagaagagtttggtgaaaagtta
gaagataaaattcctttaaaaaaacttacaaaaacatacttagaaacttttgaattaata
caagatgaaaaaacagtagaagaaatatcacaaattagagatttagcaataacttctatt
ctttctcatatctcacttttatttgaacatggtaaaatatcaaaagagaaaaaagcacaa
cttttagaacctttaactattccaagtgaaattcaaagatggattcaaactggattagag
catgaaagtttaaaagaattaagaaaatacttgtatttatatgagtatttaaataaggaa
aacaattga
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