Entry |
|
Symbol |
trmA
|
Name |
(GenBank) tRNA m5U54 methyltransferase
|
KO |
|
Organism |
amar Malaciobacter marinus
|
Brite |
KEGG Orthology (KO) [BR:amar00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:amar03016]
AMRN_2645 (trmA)
Enzymes [BR:amar01000]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
AMRN_2645 (trmA)
Transfer RNA biogenesis [BR:amar03016]
Prokaryotic type
tRNA modification factors
Methyltransferases
AMRN_2645 (trmA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2735171..2736292
|
AA seq |
373 aa
MNCIYFGKCASCTLYDKSYEEQLQYKVNIEKQRFKDLTNIEFDVIKSQDKNFRNRAEFRI
WKNFKDKEAITINYAMNDFDKNTLEIKSCEIVSEDISKLMPKLLDELQKDETLKYKLFAC
EFLNSTKGDTLITLIYHKKLEDEWISKAKLLEKKLNIKIIGRSRKQKVVLSKDYIEEELK
INNKNFFFEYKEGGFTQPNSHVNIKMIEWVLDKLEVSNKDLCELYCGGGNFTIPLSTKFK
NVLATEISKTSIKSALKNCQLNSISNIDFIRMSSEEFVEALEEKREFRRLKDIDLKSYNF
STIFVDPPRAGLDETTRKLVSNFEKIIYISCNPETLHRDLIELTKTHKIDNFALFDQFSY
TKHIESAVVLNKF |
NT seq |
1122 nt +upstreamnt +downstreamnt
atgaattgtatatattttggaaaatgtgctagttgtactttgtatgacaaatcatatgag
gaacaacttcaatataaagttaatatagaaaaacaaagatttaaagatttaactaatatt
gaatttgatgttataaaaagtcaagataaaaactttagaaatagagcagaatttagaatt
tggaaaaattttaaagataaagaagctataacaataaactatgctatgaatgattttgat
aaaaatacattagaaataaaatcatgtgaaatcgtaagtgaagatatttcaaagcttatg
ccaaaactattagatgagttacaaaaagatgaaacacttaaatataaactttttgcatgt
gaatttttaaactcaacaaaaggtgatacgcttattactttaatctatcataaaaagtta
gaagatgaatggattagtaaagcaaaacttttagaaaaaaaattaaatataaaaattatt
ggaagaagtagaaaacaaaaagttgttttaagtaaagattatattgaggaagaattgaaa
ataaataataaaaacttcttttttgaatataaagagggtggatttacacaaccaaatagt
catgtaaatataaaaatgattgaatgggtattagataaacttgaagtaagcaataaagat
ttgtgtgagctttactgtggagggggaaactttacaatacctctatctactaaatttaaa
aatgttttagcaacagaaatttcaaaaacatcaataaaatcagctttgaaaaattgtcaa
ttaaactctatatcaaatatcgattttattagaatgagtagtgaagagttcgtagaagct
ttagaagaaaaaagagagtttagaagactaaaagacattgatttaaaatcttataatttt
tcaactatttttgttgatccaccaagagcaggacttgatgaaacaactagaaaattagta
tcaaattttgaaaagataatctatatttcatgtaatccagaaacattacatagggattta
atagagcttacaaaaacacataaaattgataattttgctttatttgaccagttttcttat
acaaagcatatagaaagcgcagttgtattaaacaaattttaa |