Malaciobacter marinus: AMRN_2749
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Entry
AMRN_2749 CDS
T06187
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amar
Malaciobacter marinus
Pathway
amar03030
DNA replication
amar03430
Mismatch repair
amar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMRN_2749 (dnaE)
03430 Mismatch repair
AMRN_2749 (dnaE)
03440 Homologous recombination
AMRN_2749 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amar03032
]
AMRN_2749 (dnaE)
03400 DNA repair and recombination proteins [BR:
amar03400
]
AMRN_2749 (dnaE)
Enzymes [BR:
amar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMRN_2749 (dnaE)
DNA replication proteins [BR:
amar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMRN_2749 (dnaE)
DNA repair and recombination proteins [BR:
amar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMRN_2749 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MoCF_biosynth
Motif
Other DBs
NCBI-ProteinID:
AXX88447
UniProt:
A0A347TPB9
LinkDB
All DBs
Position
2846513..2850061
Genome browser
AA seq
1182 aa
AA seq
DB search
MSDIPKFTHLHLHTEYSLLDGANKIKPLAKKVKEMGMKSVAMTDHGNMFGAIDFYNAMRA
EGIKPIIGMEAYIHNNEEVDDKTTKQRFHLCLYAKNDVGYKNLMYLSSQAYMYGFYYYPR
INKKLLRENSEGIVCSAACLQGEINWHLNTNNERNVRNGAKGYERAKEIALEYQEIFGDD
FYLEIMRHGIPDQLFVDDMILKIAHETGIKLVATNDTHYLEQKDAGPHEAFMCIAMNKLY
DDPNRLRHSVHEFYLKSPEQIAKLYADIPEAIEATQEISDKCNLEIKLGNPTPPNFKFTR
QKLEESNLPIPYPEEEYSLENDKALFIHECWKGLEDRLKIVDSSKHQEYKERLQVEIDII
NNMKFPGYMLIVWDFVIVAKQMGIPVGPGRGSAAGSLVAYSLYITDIDPMPYGLLFERFL
NPERVSMPDIDMDFCQTRRGEIIDYVIKQYGRANVAQIITFGKLLAKGVIRDVARVLDMP
YAKADAMAKLIPDELGINLKDSWDKEPKIKELCDIDPQAKRVWEFALALEGLNRNAGTHA
AGVVISNEPLWKKTPLFKPSGLDTLATQYNGKYVEDVDLIKFDFLGLKTLTVIEEANKLI
EKRHGKRIDFIKTDVNDKGVYDLIQTGNTIGLFQIESDGMQDLCKRLAPSNFEDIIAVLA
LYRPGPMESGMLDDFIDRKHGRAQINYFYDEFDAPLRPILETTYGVIVYQEQVMQIVQTI
GGFSLGGADLVRRAMGKKIKEEMDKLKVQFAQGGVEKGYNKDHCEELFDLIVKFAGYGFN
KSHSAAYALVTFYTSYLKCYYPAEFMAALLTLEKDNTDKVVRYVDEVKRLGLDLFPPDIN
KSDLVFSAKKIDGKEVVMFGMGAIKGAGDVAIKSILKARNEGGEFKDLSDFISRIDASKV
NKRVIESLVKAGALDSFEYSRKAMLDQIEQIVEGAGKAMQAKKMATGSLFGDDEELTTVT
VELEHLPEYDSKEILEFEKNTLGFYVSGHPLDDYRDQLDKITYTLSSEIDEINDGSEVLF
VGKVETITEKISKKGNKFAILNLMDLHGNIELMMFEDKLNELKNDFKYEDEPLAFKVKIS
KDDQFTRMSLRKIENLNDAKKDKQKVKKAQKIEPPLTIAVPYSNSEELMYKLFDVIAHNQ
GKRDLRIIVKSKLGDIELESGFKVANNVENLIQNIEGVYKID
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatataccaaaatttacacatttacatttacacacagaatattcacttttagat
ggtgctaataagataaaacctttagcaaaaaaagtaaaagagatgggtatgaaaagtgtt
gccatgactgatcatggtaatatgtttggagctattgatttttataatgccatgagagct
gagggaatcaaacctatcataggaatggaagcttatattcataacaatgaagaagtagat
gataaaacgacaaaacaaagatttcatctatgtttatatgccaaaaatgatgtgggatat
aaaaatcttatgtacttaagttcacaagcttatatgtatggtttttattattatccaagg
attaataaaaaacttttaagagaaaactctgagggaattgtatgttctgctgcttgttta
caaggtgaaatcaattggcatctaaatacaaataacgaaagaaatgttagaaatggtgca
aaaggttatgaaagagcaaaagagattgcactagaatatcaagaaatttttggagatgat
ttttatttagaaattatgcgacatggtattcctgatcagctttttgttgacgatatgatt
cttaaaatagcccatgaaacaggtataaaacttgttgcaacaaatgatacacactactta
gaacaaaaagatgctggtccccatgaagcatttatgtgtattgcaatgaataaactttat
gatgatccaaatagacttagacactctgttcatgagttttatttaaaatcaccagaacaa
attgcaaaactttatgcagatattccagaagctattgaagcaacacaagagatatcagat
aaatgtaatcttgagataaaactaggaaaccctactcctccaaattttaaatttactaga
caaaaacttgaagaatcaaatttaccaattccttatccagaagaagagtactctttagaa
aatgataaagcactatttattcatgaatgttggaaaggtttagaagatagactaaaaata
gtagattcatcaaaacatcaagaatacaaagagagactacaagtagagattgatattata
aataatatgaaattccctggatatatgcttattgtttgggactttgttattgttgctaaa
caaatgggaattccagtaggtccaggaagaggttcagcagcaggaagcttggtagcatat
agtctatatattacagatattgatcccatgccttatggcttactttttgagagattcctt
aatccagaaagggtatcaatgcccgatattgatatggacttttgtcaaacaagaagaggt
gagattattgattatgtaattaaacaatatggaagagccaatgttgcacaaattattact
tttggtaaattattagcaaaaggtgtaattagagatgttgctagagttttagatatgcct
tatgcaaaagctgatgccatggcaaaactaatcccagatgaattaggaataaatttaaaa
gactcttgggacaaagagccaaaaataaaagaactatgcgatatagatcctcaagcaaaa
agagtttgggagtttgcattagctttagagggattaaatagaaatgcaggaactcacgca
gctggtgttgtaatatcaaatgaacctttatggaaaaaaacacctctttttaaaccaagt
ggtcttgatacacttgctactcaatataatggaaaatatgttgaagatgttgacttgatc
aaatttgacttcttgggtcttaaaacattgactgtaattgaagaagcaaataagcttatt
gaaaaaagacatggaaaaagaattgactttattaaaacagatgtaaatgataaaggagtt
tatgatttaattcaaacaggaaatactataggcttatttcaaatagaatcagatggtatg
caagatctttgtaaaagattagccccatcaaattttgaagatattattgccgttttagca
ctttatagaccaggtccaatggaatcaggaatgcttgatgattttattgatagaaaacat
ggaagagctcaaataaactatttttatgatgagtttgatgcaccattaagacctattctt
gaaacaacatatggggttattgtttaccaagagcaagttatgcaaattgttcaaacaatc
ggtgggttcagccttggtggtgccgatttagttagacgggcaatgggtaaaaaaattaaa
gaagagatggacaaacttaaagtacagtttgcacaaggtggagtagaaaaaggctataac
aaagaccattgcgaagaactgtttgatttaattgttaagtttgctggatatggatttaat
aaatctcactcagcagcatatgcactagtaacattttatacttcatacttaaagtgttat
tatccagcagagtttatggctgcacttcttacacttgaaaaagacaatactgataaagtt
gtaagatatgtagatgaagtaaaaaggttaggattagatctatttccacctgatattaat
aaatcagatttagtattttctgcaaagaaaattgatggtaaagaagtagttatgtttgga
atgggtgctattaaaggtgctggagatgtagccataaaatccattttaaaagcaagaaat
gaaggtggtgagtttaaggacttaagtgattttatttcaagaattgatgcaagtaaagta
aataaaagagttatagaatctctagtaaaagctggtgctttagactcttttgaatatagt
agaaaagccatgctagatcaaattgaacaaatagttgaaggcgctggaaaagcaatgcaa
gctaaaaagatggcaacaggttcactttttggtgatgatgaagaactaacaactgtaact
gttgaacttgagcatttacctgaatatgattcaaaagagattttagaatttgaaaaaaat
actttaggtttttatgtatcaggtcaccctcttgatgattatagagatcaacttgataaa
atcacttacactttaagttcagaaattgatgaaataaatgatggaagtgaagttttattt
gtaggtaaagtagaaacaatcactgaaaagatatcaaaaaaaggtaataaatttgcaatt
ttaaatcttatggatttacatggaaatattgaacttatgatgtttgaagataagttaaat
gagcttaaaaatgattttaaatatgaagatgaacctttagcttttaaagtaaaaatttcc
aaagatgatcaatttacaagaatgagtttaagaaaaatagagaacttaaatgatgcaaaa
aaagataaacaaaaagttaaaaaagcccaaaagatagaaccaccattaacaattgctgtt
ccttactcaaatagtgaagagcttatgtataaactttttgatgttattgctcataatcaa
ggtaaaagagatttaagaataatagttaaatcaaaacttggagatattgagttagaaagt
ggttttaaagttgcaaataatgtagaaaatttaattcaaaatattgagggagtttataaa
atagactaa
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