Actinomyces massiliensis: QU670_03475
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Entry
QU670_03475 CDS
T09278
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
amas
Actinomyces massiliensis
Pathway
amas03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amas00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QU670_03475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amas03021
]
QU670_03475
03400 DNA repair and recombination proteins [BR:
amas03400
]
QU670_03475
Enzymes [BR:
amas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QU670_03475
Transcription machinery [BR:
amas03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QU670_03475
DNA repair and recombination proteins [BR:
amas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QU670_03475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
PEARLI-4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
WLD72330
LinkDB
All DBs
Position
832907..836866
Genome browser
AA seq
1319 aa
AA seq
DB search
MLDANVFDRIQLGLATAEDIKSWSHGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWEC
ACGKYKRVRYKGIICERCGVEVTRSKVRRERMAHIKLAAPVTHIWYFKGVPSRLGYLLNL
APKDLEKVIYFAAYMVTEVDEEGRHDDLPSLRNELEVKKKHIEEAGLADVEARQQRLEAD
LAQLEAEGAEQSQRDKARKTAEREMTALRRKNARTLEHMDKVWDRFVSLKVGDLEGDEVL
YRDMVADYGIYFKGAMGAEAIQARLRNFDLDAEAASLAEIVANGTGQRKTRAIKRLKVIN
AFRLTDTAPESMVLDNIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMDL
GAPTIIVNNEKRMLQDAVDALFDNGRRGRPVTGVGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPSQMALELFKPFVMKRLVELKEAQNVKAAKRMVERAN
PKVWDVLAEVIGEHPVLLNRAPTLHRLGIQAFEPQLIEGKAIQLHPLVCGAFNADFDGDQ
MAVHLPLGAEAQAEARILMLSSNNILKPSDGRPVTMPSQDMIIGTYYLTSEPDPAVEVER
DAEGNEIVPSFSSFAEAVMAYDFGKLHVNAACDIRFEEGIVAPKGWQAPEDWNEGDPITL
RTSLGRALFNTALPDSFPYVNYVVDKKQLGNIVNALAENYSRVEVAASLDALKANGFYWS
TWSGITVAFADVVSPPSKPEILARYEAEAAEIEEQHSFGALTDEDRYKSLISIWTQATAE
VAEAMRENFPERNTVFQMVASGGRGNWDQIRQLAGMRGLVADPRQRLIERPIKSNYREGL
SVLEYFIATHGARKGLADTALRTADSGYLTRRLVDVSQDVIVREDDCGTRKGLTKRLVTW
KEEGDERIREVSDILETTVYGTTLARDAVDAEGNVVIPAGTDLSEAVVSKAIDAGIEEVV
CRSVLTCDSAVGTCAACYGRSLATGKRVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGAA
GAADITQGLPRVQELFEARTPKGEAAVAEAAGTLKIEDDADGKRLIITRDDGEEDLLVPV
SRRQRLLVTDGDHVEPGDALTEGPVDPKKVLRLRSVGATQRHLVDEVQDVYRSQGVDIHS
KHIEVIVRQMLRRVTVLEAGDTNLLQGDLVDVMHFRAENRRVVAEGGKPASGRTELMGIT
KASLATDSWLSAASFQETTRVLTEAAMNGKSDPLLGLKENVILGKLIPAGTGLNRYSDIE
VEPTEEVKAEVFSRTGLTEDMLGVGEAVALDDFSFGGNFSADFSDDFRTGFSASEDYQF
NT seq
3960 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgacgcaaacgtgttcgacaggatccagctcggcctggccactgccgaggacatc
aagtcctggtcgcacggcgaggtcaagaagcccgagaccatcaactaccgcactctcaag
ccggagaaggacgggctcttctgcgagaagatcttcggacccactcgcgactgggagtgc
gcctgcggcaagtacaagcgcgtgcgctacaagggcatcatctgcgagcgctgcggtgtg
gaggtcacccgctccaaggtgcgccgcgagcgcatggcccacatcaagctggccgcgccc
gtgacccacatctggtacttcaagggcgtcccctcacgcctgggctacctgctcaacctc
gcgcccaaggacctggagaaggtcatctacttcgccgcctacatggtcaccgaagtcgac
gaggagggccgccacgacgacctccccagcctgcgcaacgagctcgaggtcaagaagaag
cacatcgaggaggccggactggccgacgtcgaggcgcgccagcagcgcctcgaggccgac
ctcgcccagctcgaggccgagggcgccgagcagtcccagcgcgacaaggcccgcaagacg
gccgagcgcgagatgacggctctgcgtaggaagaacgcccgcaccctggagcacatggac
aaggtctgggaccgcttcgtcagcctcaaggtcggcgacctggagggcgacgaggtgctg
taccgcgacatggtcgccgactacggcatctacttcaagggagccatgggggcagaggcc
attcaggcccgcctgcgcaacttcgacctggacgccgaggccgcctcgctggcggagatc
gtggcgaacggcaccggccagcgcaagacccgcgccatcaagcggctgaaggtcatcaac
gccttccgcctgaccgacaccgctccggagtcgatggtcctggacaacatcccggtcatc
ccgccggacctgcgccccatggtccagctcgacggcggccgcttcgccacctcggacctg
aacgacctctaccgccgcgtcatcaatcgcaacaaccgcctcaagcggctgatggacctg
ggcgctccgacgatcatcgtcaacaacgagaagcgcatgctccaggacgccgtcgacgcc
ctgttcgacaacggccgccgtggccgccccgtcaccggtgtgggcaaccgcccgctgaag
tccctgtccgacatgctcaagggcaagcagggccgcttccgccagaacctcctgggcaag
cgcgtggactactcgggccggtccgtcatcgtggtgggcccccagctcaagctgcaccag
tgcggcctgcccagccagatggccctggagctgttcaagcccttcgtcatgaagcggctc
gtggagctcaaggaggcccagaacgtcaaggccgccaagcgcatggtggagcgcgccaac
cccaaggtctgggacgtgctggccgaggtcatcggcgagcaccccgtgctgctcaaccgc
gcccccacgctgcaccgcctgggcatccaggccttcgagccccagctcatcgagggcaag
gccatccagctccacccgctggtgtgcggcgccttcaacgccgacttcgacggcgaccag
atggcggtccacctgccgctgggcgcggaggcgcaggccgaggcccgcatcctcatgctg
tcgagcaacaacatcctcaagccctccgacgggcgcccggtgaccatgcccagccaggac
atgatcatcggcacctactacctcaccagcgagccggatccggccgtcgaggtcgagcgc
gatgccgagggcaacgagatcgtcccgtccttctcctccttcgcggaggcggtcatggcc
tacgacttcggcaagcttcacgtcaacgccgcctgcgacatccgcttcgaggagggcatc
gtggcgcccaagggctggcaggcccccgaggactggaacgagggcgacccgatcaccctg
cgcacctcgctgggccgggccctgttcaacacggcgctgcccgactccttcccctacgtc
aactacgtggtggataagaagcagctgggcaatatcgtcaatgccctggccgagaactac
tcccgcgtcgaggtggccgcttcgctggacgccctcaaggccaacggcttctactggtcc
acctggtccggcatcaccgtggccttcgccgacgtcgtctccccgccctccaagcccgag
atcctcgcccgctacgaggccgaggccgccgagatcgaggagcagcacagcttcggcgcc
ctgaccgatgaggaccgctacaagtccctcatcagcatctggacccaggcgaccgccgag
gtcgccgaggcgatgcgcgagaacttccccgagcgcaacaccgttttccagatggtggcc
tccgggggccgcggcaactgggaccagatccgtcagctcgccggtatgcgcggcctcgtg
gccgaccccaggcagcgcctcatcgagcgcccgatcaagtccaactaccgggagggcctg
agcgttctggagtacttcatcgccacgcacggagcccgcaagggcctggcggacacggcg
ctgcgcaccgccgactccggctacctgacgcgccgactggtggacgtctcccaggacgtc
atcgtccgtgaggacgactgcggcacccgcaaggggctgaccaagcggctggtgacctgg
aaggaggagggcgacgagcgcatcagggaggtctccgacatcctggagaccaccgtctac
ggcacgacgctggcccgcgacgccgttgatgccgagggcaatgtcgtcatccccgcggga
accgatctgagcgaggccgttgtctccaaggccattgatgccgggatcgaggaggtcgtg
tgccgctcggtgctgacctgcgactccgccgtcggcacctgcgccgcctgctacgggcgt
tcactggcgaccggcaagcgcgtcgatatcggcgaggccgtcggcatcatcgccgcccag
tccatcggcgagcccggcacgcagctgacgatgcgcaccttccacaccggtggtgcggcg
ggcgccgctgacatcactcaggggctgcctcgcgtccaggagctcttcgaggcccgtaca
cccaagggcgaggcggccgtggccgaggccgcgggcaccctcaagatcgaggacgacgcc
gatggcaagcgcctgatcatcactcgcgacgacggcgaggaggacctgctggtcccggtg
tcgcgtcgccagcgcctgctggtgaccgacggcgatcacgtggagccgggcgatgccctc
accgaggggccggtcgaccccaagaaggttctgcgtctgcggtccgtgggcgccacccag
cgccacctggtggacgaggtgcaggacgtctaccgctcccagggcgtggacatccactcc
aagcacatcgaggtcatcgtgcgtcagatgctgcgtcgcgtcaccgtactggaggccggg
gacaccaatctccttcagggagacctggtcgacgtcatgcacttccgcgccgagaaccgt
cgcgtcgttgccgagggcggcaagcccgcctccgggcgcactgagctcatggggatcacc
aaggcctccctggccacggactcctggctgagcgccgcctccttccaggagaccacccgc
gtcctcacggaggccgccatgaacggcaagtcggacccgcttctgggtctgaaggagaac
gtcatcctcggtaagctcatccccgcgggcacgggcttgaaccgctactcggatatcgag
gtcgagcccaccgaggaggtcaaggccgaggtcttctcccggaccggcctcaccgaggac
atgctgggcgttggcgaggccgtcgcactggacgacttctccttcggcggaaacttcagc
gccgacttctccgacgacttccgcactggattctccgcgagcgaggactatcagttctga
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