Actinomyces massiliensis: QU670_05810
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Entry
QU670_05810 CDS
T09278
Name
(GenBank) helicase-related protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
amas
Actinomyces massiliensis
Pathway
amas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QU670_05810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amas03019
]
QU670_05810
03400 DNA repair and recombination proteins [BR:
amas03400
]
QU670_05810
Enzymes [BR:
amas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QU670_05810
Messenger RNA biogenesis [BR:
amas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QU670_05810
DNA repair and recombination proteins [BR:
amas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QU670_05810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Pribosyltran
HEM4
RecQ_Zn_bind
Motif
Other DBs
NCBI-ProteinID:
WLD72762
LinkDB
All DBs
Position
complement(1372224..1374629)
Genome browser
AA seq
801 aa
AA seq
DB search
MSPPAADTPPDDINGIDEIDDPLEMSSASPLRERAEAVLRELVGRSDAHLREDQWRAIRA
LVVQRRRALVVQRTGWGKSAVYFVATVLLREGWGPERFDSGAGAHSAEGAAGGAWAPPTP
PPARQPGPASGPTVIISPLLALMRDQVSAARRAGINAVTINSANAAQWQEIEAQVRDGAV
DVLLVSPERLNNPAFRDEVLPHLAADAGLVVIDEAHCISDWGHDFRPDYRRIRTLLADLP
PRTPVLATTATANARVTADVAEQLAGNASEPPDAQVLVMRGSLERDSLHLGVRRLPDAAS
RLAWLTAYLRDAPGSGIVYCLTVSAAGEVSERLRDAGVKAAVYTGQTDAAERERLEEDLK
ENRVKALVATSALGMGFDKPDLAFVVHMGAPSSPVSYYQQVGRAGRGVDRAEVVLLPGAE
DRSIWDWFGAQGFPPEPAVREVLAALDDAAEEGGGSLSTNVLETVTSLRRTRLESMLKVL
DVDGAVRRVRGGWTSTGRPWVYDAERYARVEAARVHEQEAMLRYESLEAPECRMAFLRSA
LDDPTMRAGWRCGACDLCGGLTLAREPQEEELRAARASLSQVGVALTPRRQWPTGMDRLG
LPALRGRIKESERAGTGMAVGRMDGLGVAGALRELIEPGSDAEVPNALRAPVLQVAERLA
ALIEDTTGENDEDARTIPADSSSQPDGLPLCIVLIESRRRPRLVRHIGRALAHHLAAMPL
GIIGVRGDPGRHDVGSAHRLAEVARSLTLDEWSDDARARLHGARVILVDDWTNSGWTLTV
AASILRRAGATAVHPFVLAQR
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgagcccgcccgccgccgacactccccctgatgacatcaacggcatcgacgaaatcgac
gaccccctcgagatgtcctccgcttctccgctccgcgagcgcgccgaggcggtcctgcgc
gagctcgtcgggcgcagcgatgcccacctgcgggaggaccagtggcgagccatccgcgcc
ctggtggtccagcgccgtcgagccctggtggtccagcgcaccggttgggggaagtctgcc
gtctacttcgtggcgacagtcctgctgcgcgagggctggggacccgagcggttcgactca
ggtgccggggcgcacagcgccgaaggtgctgcgggaggcgcatgggcaccgcccactccg
ccgcccgccaggcagcccggccccgcatccggaccgacggtcatcatctccccgctgctg
gccctcatgcgcgaccaggtctcagccgcccgccgcgcgggcatcaatgccgtcaccata
aactccgccaacgccgcgcagtggcaggagatcgaggcccaggttcgcgacggcgccgtc
gacgtcctactggtgtcccccgaacggctcaacaacccggccttccgggacgaggtcctc
ccccacctggccgctgacgccggcctggtggtcatcgacgaagcgcactgcatatcggac
tggggccatgatttccgtcccgactatcggcggatccgcaccctgctggcggatctgccc
ccgcgcacgccggtcctggccaccacggcgacggccaacgcccgtgtcacggccgacgtc
gccgagcagctcgccggtaacgcatcggagcccccggacgcacaggtcctcgtcatgaga
gggtccttggagcgggactcccttcacctgggcgtgcgccgcctgcccgatgccgcgtcg
cgcctggcatggctgaccgcatatcttcgcgacgctcccggttcgggaatcgtgtactgc
ctgacggtctcagcagccggggaggtgagcgaacgtctacgcgacgcgggtgtgaaagcg
gccgtctacaccgggcagaccgacgcggcggaacgggagcgccttgaggaggacctcaag
gagaaccgagtcaaggcgcttgtggcgacctcggccctgggcatgggtttcgacaagccc
gacttggcattcgtggtccatatgggggcgccgagctcaccggtgtcctactaccagcag
gtcggacgagccggtcggggcgtcgatcgcgccgaggtggtgctactgccgggagccgag
gaccgctccatctgggactggttcggtgctcagggattcccgcccgagcccgcggtccgt
gaggtcctggcggctctcgatgacgccgccgaggagggcgggggatcgttgagcacgaat
gtgctggagaccgtcacgagtctgcgccgcacacgactggagtccatgctcaaggtcctg
gacgtcgacggcgcggtgcggcgggtgcggggaggctggacgtccactggccggccctgg
gtctacgatgccgagcggtacgcgcgcgtcgaggccgctcgagtccacgagcaggaggcg
atgctccgctatgagtcgctggaggcgcccgagtgccggatggccttcctgcgctcggcc
ctcgacgacccgacgatgcgcgcaggctggcgctgcggggcgtgcgacctgtgcggcggt
ctcacattggcccgagagccgcaggaggaggaattgagagcggcccgcgcctcactgtcc
caggtgggggtcgccctgacaccccgccggcagtggcccaccgggatggacagactcgga
ctgcccgctctacgcggacggatcaaggagtccgagcgcgccggaacgggcatggccgtg
gggaggatggacggcctgggcgtggccggggcactgcgcgagctgatcgagccgggctct
gatgccgaggttcccaacgcactgcgggccccggtacttcaggtagccgaacgcctggcg
gccctcattgaggacacgacgggagagaatgacgaagatgccagaaccatccctgcggac
tcgtcctcacagccggacggcctaccgctgtgcatcgttctcatcgagtcgcggcgccgc
ccccgactcgtgcgccacataggtcgggcactcgcccatcacctcgccgccatgcccttg
ggaataatcggagttcgcggcgatccgggccgtcacgacgtcggcagcgcccaccggctc
gccgaggtggcgcgctccctgaccctggacgagtggtcggatgacgcccgggcccgactc
cacggggcgcgggtgatcctcgtcgacgactggaccaactcggggtggacgctcacggtc
gccgcctcgatactgcggcgggccggggcgacggcggtgcatcccttcgtgctggctcag
cgctga
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integrated database retrieval system
