Actinomyces massiliensis: QU670_06785
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Entry
QU670_06785 CDS
T09278
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
amas
Actinomyces massiliensis
Pathway
amas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QU670_06785
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amas03019
]
QU670_06785
03009 Ribosome biogenesis [BR:
amas03009
]
QU670_06785
Enzymes [BR:
amas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
QU670_06785
Messenger RNA biogenesis [BR:
amas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QU670_06785
Ribosome biogenesis [BR:
amas03009
]
Prokaryotic type
rRNA processing factors
QU670_06785
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
TcdA_TcdB
Motif
Other DBs
NCBI-ProteinID:
WLD72931
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All DBs
Position
1593740..1596481
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AA seq
913 aa
AA seq
DB search
MKPEKAEKIEKAEKAGRASAGAAPTRRRRKATAATTAPAQAPVAEQPILTEDSRDSRRDP
DGEARAQGNQETQETQARAADADQVAEAIDAAESSDLEVPEVTEDAEDAEDAEGTEASEA
ENAEADDGSENAQAGAERGDEAGAPGWAPYLPAASLLFQAPDPARARRRRRKVTAATTAP
AQVPAAEQPALTAAQDDEGDSGARASGEPATASKGGRRRRRKATAAQAAPEHLEAPADDS
DDSDDMNDSGNVGESENRGDADGDSRDDERDGAGRRKRRRGGRGRRTRSRNETRQGGEKE
DGKEDKGKGKEDSDSDSADPRSSRADAEETADAAEEASSSRRRRRRSRSRTRSDAGRDPR
DEVTALKGSTRLEAKRQRRREGRAAGRRRPIVTEAEFLARRESVDRQMIVREQDGLNQIA
LLEDGLLVEHYVARHTQISMVGNVYVGRVQNVLPSMEAAFVDLGKGRNAVLYAGEVNWDA
AGMEGKPRRIEDALSSGDTVLVQVTKDPIGHKGARLTSQITLAGRYLVLVPGGTMTGISR
KLPDTERARLKKILKRIIPDDAGVIVRTAAEGASEEQLTADVKRLISQWQTIDKKASSVF
KGSSKAPVLLKGEPELAVRVVRDVFNEDFRRLVVQGSGAWKTISQYVDELSPDLADRLEH
WVDAEDVFAAHRVDEQLAKGFDRKVWLPSGGTLIIDRTEAMTVIDVNTGRFTGGAGGTLE
ETVTRNNLEAAEEIVRQLRLRDIGGMVVIDFVDMVLESNRDLVLRRLIECLGRDRTRHQV
TEVTSLGLVQMTRKRVGQGLVEAFSTPCECCGGRGFIVHDNPVENQAADMSASGRKGAGR
RGRKNREESAASRSSRRSGGPAEARSEASQAEAPKRDDAARAAVRGALAQIAAATEQAHS
HSPEHAGAGHEGS
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgagaaggctgagaagatcgagaaagctgagaaggcggggagggcatcggct
ggagcggcgccgactcggcggcgtcgtaaggcgaccgccgcgacgactgcccccgcacag
gctcctgttgccgagcagccgatcctgaccgaggactctcgggactcgcgtcgtgatcct
gacggcgaggcgcgtgctcaggggaatcaagagactcaggagactcaggccagggccgcg
gatgccgaccaagtcgcggaggcgatcgatgctgcggagtcgtcggatctcgaagtccct
gaagtcactgaagacgctgaagacgctgaagacgcagaaggaaccgaggcctctgaggct
gagaatgccgaagctgatgatgggtctgagaacgcgcaggccggcgccgagcggggcgac
gaggccggtgcgcccgggtgggcgccgtatcttcccgctgcgtcgctgctgtttcaggct
ccggaccccgcgcgcgctcgacgccgtcgtcgtaaggtgactgccgcgacgaccgctccc
gcacaagttcctgccgccgagcagcccgctctgacagctgcgcaggatgatgagggagac
tccggggcccgcgcctccggcgagcccgcgaccgcgtcgaagggcggcagaaggcggcgc
cgtaaggccacggcggcccaggccgcgcccgaacatctcgaggcgccggcggatgactcg
gacgactcggatgacatgaatgactccgggaatgtcggggagtctgagaatcggggcgac
gccgatggcgattcccgggatgacgagcgcgatggcgcgggccgccgcaagcgtcgccgt
ggaggccgcggccgcaggacccgttctcgcaatgagacgcgtcaggggggcgagaaggag
gacggaaaagaggataaaggtaaaggtaaagaggactcggattctgattccgctgatccc
cgaagctcgagggccgatgccgaggagactgctgacgcggctgaggaggcttcctccagt
cgccgacgtcgccgccgctcgcgctcccgcacccgttccgacgccggtagggatccccgt
gacgaggtcaccgcactcaaaggatcgacccgcttggaggccaagcgtcagcgtcgtcgc
gagggacgcgcggccggacgccgtcgccccatcgtcaccgaggcggagttcctggcccgc
cgtgagagtgtggaccgccagatgatcgtgcgcgagcaggacggtctcaatcagatcgct
ctgcttgaggacggactgctcgtcgagcactacgtcgcccgtcatacgcagatatccatg
gtcggcaatgtctacgtcggtcgggttcagaacgtgctgccgtccatggaggcggccttc
gtggacctgggcaaggggcgcaacgccgtgctgtacgccggcgaggtcaactgggacgcc
gccggcatggagggtaagccccgtcgtattgaggacgctctctccagcggcgacacggtc
ctcgtgcaggtcaccaaggaccccatcgggcacaagggcgcgcgcctgaccagccagatc
acgttggcgggtcgctatctcgtgctggtcccgggaggcacgatgacgggcatctcccgc
aagcttccggacaccgagcgcgcgcgcttgaagaagatcctcaagcgcatcatccccgat
gacgccggcgtcatcgtgcgcactgccgccgagggcgccagtgaggagcagctcactgct
gatgtcaagcgcctcatctcccagtggcagaccatcgataagaaggcctcctctgttttc
aagggttccagcaaggctcccgttcttctcaagggagagcccgagctggcggtgcgcgtc
gtgcgcgatgtcttcaatgaggacttcaggcgcctggtcgttcaaggatccggcgcttgg
aagacgatcagccagtacgtggacgagttgagcccggatctggcggatcgccttgagcac
tgggtggatgcagaagatgtcttcgccgcccatcgagtcgatgagcagctcgccaagggg
ttcgatcgcaaggtctggcttcccagcgggggaacgctcatcatcgaccgcactgaggcc
atgacggtcattgacgtcaacaccggtcgtttcaccggaggcgccggaggcactcttgaa
gagacggtcacgcgcaacaacctcgaagccgccgaggagatcgtccgccagctgcgactg
cgcgacatcggcggaatggtggtcatcgacttcgtggacatggttctggagtccaaccgc
gacctcgttctacgccgcttgatcgagtgcctcgggcgagaccgcactcgccaccaggtc
accgaggtgacgtctctcggactggtgcagatgactcgcaagcgtgtgggccaaggattg
gtcgaggcgttctccaccccgtgcgagtgctgcggagggcgcggtttcatcgtccacgac
aatccggtcgagaaccaggccgcggatatgtcggcctccggtcggaagggggcggggcgc
cgcggtcgcaagaatcgagaggaatccgctgcatcccggtcgtccaggcggtccggcggc
cctgcggaggcgcgcagcgaggccagtcaggctgaggcccccaagcgcgatgacgccgcg
cgtgccgcagtgcgcggggctctggctcagatcgccgccgcgaccgagcaggctcacagt
cattctcccgagcatgcgggggccggtcatgagggctcatga
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