Actinomyces massiliensis: QU670_13770
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Entry
QU670_13770 CDS
T09278
Name
(GenBank) ATP-dependent helicase C-terminal domain-containing protein
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
amas
Actinomyces massiliensis
Brite
KEGG Orthology (KO) [BR:
amas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amas03019
]
QU670_13770
Enzymes [BR:
amas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
QU670_13770
Messenger RNA biogenesis [BR:
amas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
QU670_13770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
AAA_22
AAA_16
AAA_19
AAA_25
AAA_30
CON_HrpB
AAA_11
ResIII
Cas3-like_C_2
Helicase_RecD
nSTAND3
ParA
UvrD-helicase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
WLD71496
LinkDB
All DBs
Position
3235994..3238771
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AA seq
925 aa
AA seq
DB search
MDSSAPDPLARLLAAPPRLPAREALPRLRELLADDPGHGIVVTAPPGTGKTTLVPPLVAH
ALTTPEDGGRVIVTQPRRIAARAAARRLADLLDEPLGNTVGYAVRGEREAGPHTRIEVVT
AGLLLRRLQADPDLPGVAAVVLDEVHERSLESDLLLTLLLDARALREDLVIIAMSATADL
DRLPTMLGAGSPDAAAADSAADGGNSTDGPGLAPEAPIVSVTGSLHPLQEVWAPPPSRTP
RLGPHGVPREFLAHVAATAQRALTERTGDALVFLPGAREVEDVVSRLHGSVPESVDVLPL
HGRLSARAQDAALAPSPPGHRRVVVATNVAESSLTVPGVRVVVDAMLTRQPRLDVARGMS
GLVTVGASRAEGVQRAGRAGREGPGVVYRCCTPTDWARAPQAPVPEILSADLTRLVLELA
VWGAPDGAGLTWLDPPPAPAMEAARTALQRLGLLEDDAEADGAAAAVTVLGRAVARIPAD
ARLARALLTARGTVGARRAAEGTALLSAELRAPGGDLTALARSVHDDGASASAWRAEARR
LERAAESAGRILDQARRAAGSVPSAGAAPTDGPQTPAGSAPAAATPTTPLSEAVALVAAL
ARPEWIARRRGPTPSAGEPAFYTSVGGAGMRTARESALSSSPWLAVADVDAALGRGDASV
RAAAPIDDELALSVGAPWLIEEERVVWAQGRLRSERLRRLGAITLTTTPGGTPPPSAVAG
AVVEACRAEGLDVLPWNEAGELRARLALLHRELDEPWPAMDDDALLARAGLWLVPAVEAL
AARGRRFDLGRLDVGAALRALLPWPEAAGLDDLAPERIEVPSGSRVRASYVGEQGEMLQR
PILAVRLQECFGWADTPRVVDGRVPVLIHLLSPARRPVAVTDDLRSFWAGPYRQVRAELR
GRYPKHPWPEDPWTAPATRGTRRRG
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
gtggactcaagcgctcccgatcctcttgcccggcttctcgcggctcctccgcggctgccc
gcgcgcgaggccctcccccggctccgcgagctgctggccgacgatccggggcacggcatc
gtcgtcaccgccccgcccggcaccggcaagaccactctcgtcccgcccctggtcgcccac
gccctcaccacccccgaggacggcgggcgcgtcatcgtcacccagccccgccgcatcgcc
gcccgagccgccgcacggcgcctggcagacctgctcgacgagccactgggcaacacagtc
ggctacgcagtgcgcggagaacgggaggccggcccgcatacgcgcatcgaggtggtcacc
gccgggctgctgctgcgccgcctgcaggccgaccccgatctgcccggggtggcggccgtg
gtcctggacgaggtgcacgagcggtccctggagtccgacctgctcctgacgctcctcctg
gacgctcgcgccctgcgcgaggatctggtcatcatcgccatgtcggccaccgccgacctc
gaccgcctgcccaccatgctcggggcaggctccccggacgcagccgccgccgattccgcc
gccgacggcggcaacagcactgacggccccggcctcgcccccgaagcgcccatcgtctca
gtcaccggttcactccatccgcttcaggaggtgtgggcgcccccgccgtcgcgcacgccc
cgcctgggcccgcacggcgtgccgcgggaattcctcgcccatgtcgccgccaccgcgcag
cgggcgctcaccgagcgcaccggcgacgcgctcgtcttcctgcccggagcccgagaagtc
gaggacgttgtgagccgcctgcacggctccgtgccggagagcgtcgacgtcctgcctctg
cacgggcggctgagcgctcgcgcccaggatgccgccctggccccgtcgccgcccggtcac
cggcgcgtggtcgtggccacgaacgtggccgaatcctcgttgaccgtgccgggggtgcgc
gtcgtcgtcgacgccatgctgacccggcagccgcgcctcgacgtcgctcgcggcatgtcg
gggctggtgacggtcggcgcttcccgagcggagggcgtccagcgggccgggcgcgcggga
cgcgaagggcccggcgtcgtttatcggtgctgcacgccgacggactgggcgcgcgcaccg
caagcgcccgtaccggagatcctgtccgccgacctgactcgcctcgtcctcgagctcgca
gtatggggcgctccggacggcgccggcctgacctggctcgatccgccgcccgccccggcc
atggaggctgcgcgtaccgcgctgcagcgcctgggactgctggaggacgacgcggaagcc
gacggggcagccgcggctgtgaccgtgctagggcgcgccgtggcccgaattccggccgat
gcccgtctcgcacgcgctctgctgacggctcgcgggaccgtgggcgccaggcgagccgcc
gagggcaccgccctgctcagcgcggaactgcgcgcgcccggcggcgatctgaccgcactg
gcgcgcagcgtgcacgacgacggcgcatcggcgagcgcctggagagcggaggcccgccgc
ctggagcgggcggccgagtcggcgggccgcatcctcgaccaggcccgccgcgcagccggt
tcggtaccctcagccggggcggcgcccacggacggaccgcaaaccccggccgggtctgcg
cccgcagccgcgaccccgaccactcccctgtccgaggcagtcgcgctggtggcggccctc
gcccgtcccgagtggatcgcacgccgccgtggcccgacgccctccgcaggggagccggcc
ttctacaccagcgtcggcggcgcgggcatgcgcactgcgcgggaatccgccttgagctcg
tcgccgtggctggccgtggccgatgtcgatgccgcactcgggcgcggggacgcgtcagtt
cgggcggcggcgccgatcgacgacgagctcgccctgagcgttggcgcgccgtggctcatc
gaggaggagcgggtcgtgtgggcccaggggcggctgcgctccgagcggctgcggcgcctg
ggtgcgatcacgctgacgacgacaccgggcgggactccgcccccgtccgccgtggccggc
gccgtcgtcgaggcctgcagagccgaagggctcgacgtgctgccgtggaacgaggccggc
gagctgcgggcgcgcctggcgctgctccaccgcgagctggacgagccgtggcccgcaatg
gacgacgacgccctcctggcccgggccgggctgtggctggtgccggcggtcgaagcactc
gcggcccgagggcggcgattcgacctggggcgtctcgacgtcggtgcggcgctgagggca
ctgctgccgtggccggaggcggccgggctcgacgatctcgcgccggagcggatcgaggtg
ccgtcgggctcacgcgtacgggcgtcctatgtcggcgagcagggcgagatgctccagcga
ccgatcctggcggtgcgcctgcaggagtgcttcggctgggcggacacgccccgggtggtg
gacggacgggtgccggtgctgatccatctgctgtccccggcacgacggccggtcgcggtg
accgacgacctgcgctcgttctgggccggcccctaccggcaggtgcgtgcggagctgagg
ggcaggtaccccaagcacccctggcccgaggacccgtggacggcaccggcgacccgcggg
acgcgacggcgcggctga
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