Agromyces marinus: DSM26151_06580
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Entry
DSM26151_06580 CDS
T08161
Symbol
mutM_1
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
amau
Agromyces marinus
Pathway
amau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DSM26151_06580 (mutM_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amau03400
]
DSM26151_06580 (mutM_1)
Enzymes [BR:
amau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
DSM26151_06580 (mutM_1)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
DSM26151_06580 (mutM_1)
DNA repair and recombination proteins [BR:
amau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DSM26151_06580 (mutM_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
DUF7183
Motif
Other DBs
NCBI-ProteinID:
UIP57792
LinkDB
All DBs
Position
697756..698649
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AA seq
297 aa
AA seq
DB search
MPESPEVQALADELAARLVGRAIAAVDVLEFRVTKTRARPLTSLVGERVTGVARHGKLVA
VAFDGSEHLVVSLGRHGWARWRAQGEAEAAQSPQPEPGASPDQGQPEPPPPALVVIEFDE
GPAFELTDAGGWVSLGGWVVDEPVEVPAIAGLGPDPADPGFTRADFDRAFAGRRKQVKAI
LQEQESLAGIGNAYSDEILHAARVSPVAHAATLGAEDHDRLFAATVDVVRSAIAERRGIP
IDRQKQVKVASMRAHGRAGEACPRCGDAIRDFTFASTTAQYCPTCQTGGEVLPLKGA
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgccggaatccccggaggtgcaggccctcgccgacgaactcgcggcgcggctcgtcggg
cgcgcgatcgccgcggtcgacgtgctcgagttccgcgtgaccaagacccgggccaggccc
ttgacgagcctcgtcggcgagcgggtgaccggcgtcgcgcgtcacggcaagctcgtcgcc
gtcgcgttcgacggctcggagcacctcgtggtctcgctcggtcgccacggctgggcgcgc
tggcgcgcgcagggcgaggccgaggccgcgcagtcaccgcagcccgaacccggcgcgtcg
ccggatcaaggacagccggagccgccgccgcccgccctcgtcgtgatcgagttcgacgag
gggcccgcgttcgagttgaccgacgccggcggatgggtgtcgctgggcgggtgggtcgtc
gacgagcccgtcgaggttcccgcgatcgccgggctcggccccgacccggccgacccgggg
ttcacccgcgccgacttcgatcgcgcgttcgcggggcgccgcaagcaggtcaaggccatc
ttgcaggagcaggagtccctcgcgggcatcggcaacgcgtactccgacgagatcctgcac
gcagcccgggtctcgccggtggcgcatgctgcgacgctcggcgcggaggatcacgaccgg
ctgttcgccgccacggtcgacgtcgtccggtccgcgatcgccgagcgccgcggcatcccg
atcgaccgccagaagcaggtcaaggtcgcgtcgatgcgcgcccacggtcgcgccggcgaa
gcctgcccgcgctgcggcgacgcgatccgcgacttcaccttcgcgagcaccacggcgcag
tactgcccgacgtgccagaccggcggcgaggtgctgccgctcaagggggcgtga
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