KEGG   Agromyces marinus: DSM26151_10830
Entry
DSM26151_10830    CDS       T08161                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
amau  Agromyces marinus
Brite
KEGG Orthology (KO) [BR:amau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:amau03016]
    DSM26151_10830 (truB)
Enzymes [BR:amau01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     DSM26151_10830 (truB)
Transfer RNA biogenesis [BR:amau03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DSM26151_10830 (truB)
 Prokaryotic type
    DSM26151_10830 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB_C PseudoU_synth_2 DKCLD
Other DBs
NCBI-ProteinID: UIP58212
LinkDB
Position
1165374..1166279
AA seq 301 aa
MNSGILLVDKPQGMTSHDVVARVRRLAGTRKVGHAGTLDPMATGLLLIGVEGSTRLLHHL
VGLDKEYLATIRLGWGTTTDDAEGEALPAASADLVAGLGREAVLARMAELTGTIDQVPSS
VSAVKVDGKRAYRRVRDGEAVDLPARTVTVSVFEAGAQRAGDGWLDLDVRVACSSGTYVR
ALARDLGAGLGVGGHLTALRRTRIGAFDVAEAGGLEGFDVAAARLAPAAAARRVLPAIGV
DEDGVRDLRHGKRIAAPPGAGTIAAGDPIAAVGPGDVLVAVVERRGPQLKVVTGFPAEEG
A
NT seq 906 nt   +upstreamnt  +downstreamnt
gtgaacagcggcatcctcctcgtcgacaagccgcaggggatgaccagccatgacgtcgtc
gcccgcgtgcggcgactcgcgggcacgcgcaaggtcggccacgccggcacgctcgacccg
atggccaccggcctgctcctgatcggcgtcgagggctccacgcgcctgctgcaccacctc
gtcgggctcgacaaggagtacctcgcgacgatccgactcgggtggggcacgacgaccgac
gatgccgagggggaggcgctgcccgcggcatccgccgacctcgtcgcgggcctcggacgc
gaggcggtcctcgcccgcatggccgagctcacgggcaccatcgaccaggttccgagctcg
gtcagcgcggtcaaggtcgacggcaagcgcgcctaccgccgtgtgcgcgacggcgaggcc
gtcgaccttccggccaggacggtgaccgtgtcggtcttcgaggcgggcgcccagcgggcg
ggcgacggatggctcgacctcgacgtgcgcgtcgcgtgctcgtccggcacctacgtgcgc
gcgctcgcgcgcgacctcggcgcggggctcggcgtcggcgggcacctgaccgcgctgcgt
cgcacccggatcggcgcgttcgacgtcgccgaggccggcgggctcgaggggttcgacgtc
gcggccgccaggctcgcgccggcggccgccgcgcgccgcgtgctccccgcgatcggggtc
gacgaggacggcgtgcgcgacctgcgccacggcaagcgcatcgcggcgccgccgggggcc
gggaccatcgcggccggcgatcccatcgcggcggtcggcccgggcgacgtgctcgtcgcc
gtcgtcgaacgacgcggcccgcagctcaaggtcgtcaccggattccccgccgaggagggc
gcatga

DBGET integrated database retrieval system