Agromyces marinus: DSM26151_11930
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Entry
DSM26151_11930 CDS
T08161
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
amau
Agromyces marinus
Pathway
amau00300
Lysine biosynthesis
amau00470
D-Amino acid metabolism
amau01100
Metabolic pathways
amau01110
Biosynthesis of secondary metabolites
amau01120
Microbial metabolism in diverse environments
amau01230
Biosynthesis of amino acids
Module
amau_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
amau00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
DSM26151_11930 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
DSM26151_11930 (dapF)
Enzymes [BR:
amau01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
DSM26151_11930 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
UIP58322
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All DBs
Position
1268911..1269792
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AA seq
293 aa
AA seq
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MAFDLRFTKGQGTGNDFVLTSDPDGEHPLDPTRIAAVCDRRFGVGADGFIRAVRSERLPE
GEAALAEDPGATWFMDYWNADGSPSEMCGNGIRVFLRFLIDQGLIAPVDGEWVAIGTRAG
VRRVRTSPGGFEADLGLWRLDGGEPLVRAKNLPVARPGIGIDVGNPHVVVALADDDELDG
LDLSYVPVVEPAPDTGANIEFVVPADPLVDGGRGRIRMRVHERGSGETLSCGTGAVASAL
AVRYWAGAGAPDEWIVQVPGGVVGVRMQVQGDGEHVLLSGPGELVFDGVLSLG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcgatctgcgcttcaccaagggccagggcacgggcaacgacttcgtgctgacc
agcgaccccgacggggagcacccgctcgaccccacgcggatcgcggccgtgtgcgatcgc
cggttcggcgtcggcgccgacgggttcatccgggcggtgcgctccgagcgactgcccgag
ggcgaagccgcactcgcggaggatccgggcgcgacgtggttcatggactactggaacgcc
gacggcagcccgtccgagatgtgcggcaacggcatccgcgtgttcctgcgcttcctcatc
gaccaggggctcatcgcacccgtcgacggcgaatgggtcgcgatcggcacgcgtgccggg
gtgcgccgggtgcgcacgtcgcccggaggcttcgaggccgacctgggcctctggcgcctc
gacggcggcgagccgctcgtgcgcgcgaagaacctgcccgtcgcgcgccccgggatcggc
atcgacgtgggcaatccgcacgtcgtggtcgccctcgccgacgacgacgagctcgacgga
ctcgacctgtcgtacgtccccgtggtcgaaccggcgcccgacaccggcgcgaacatcgag
ttcgtcgtgccggccgacccgctcgtcgacggcggccgcggccgcatccgcatgcgcgtg
cacgagcgcgggtcgggggagaccctctcgtgcggcacgggagcggtcgcctcggcgctc
gcggtgcggtactgggcgggcgcgggcgccccggacgagtggatcgtgcaggtgcccggc
ggcgtcgtcggcgtgcgcatgcaggtgcagggcgacggcgagcacgtgctgctctcgggc
ccgggcgaactcgtcttcgacggggtgctcagcctgggctga
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