Agromyces marinus: DSM26151_13170
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Entry
DSM26151_13170 CDS
T08161
Symbol
dnaE1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amau
Agromyces marinus
Pathway
amau03030
DNA replication
amau03430
Mismatch repair
amau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DSM26151_13170 (dnaE1)
03430 Mismatch repair
DSM26151_13170 (dnaE1)
03440 Homologous recombination
DSM26151_13170 (dnaE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amau03032
]
DSM26151_13170 (dnaE1)
03400 DNA repair and recombination proteins [BR:
amau03400
]
DSM26151_13170 (dnaE1)
Enzymes [BR:
amau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DSM26151_13170 (dnaE1)
DNA replication proteins [BR:
amau03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DSM26151_13170 (dnaE1)
DNA repair and recombination proteins [BR:
amau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DSM26151_13170 (dnaE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
DUF6282
Motif
Other DBs
NCBI-ProteinID:
UIP58442
LinkDB
All DBs
Position
1400813..1404331
Genome browser
AA seq
1172 aa
AA seq
DB search
MAADSFVHLHVHSEYSMLDGAARVGELMKAAAAEGMPAVAMTDHGNVFGAFDFWKQATDA
GVKPIIGTEAYLTPGTHRSDKTRVRWGNGGGDDVSGAGAYTHMTLLSETNEGMHNLFRLS
SRASIEGYYFKPRMDRELLQTYSKGLIATTGCPSGEVQTRLRLGQYDEAVAAAAEFRDIF
GRENFFAEIMDHGLGIEKRIMDDLLRLARQLDLPLVATNDLHYTHAHDAKSHAALLCVQS
GSTLDDPNRFKFDADEFYLKSAAEMRHLFRDHPEACDNTLLIAERCDVQFNTNANYMPRF
PVPEGEDEQSWFVKEVERGLHERYPGGIPDEVRKQADYEVGVISQMGFPGYFLVVADFIN
WSKRNGIRVGPGRGSGAGSMAAYAMKITDLDPLQHGLIFERFLNPDRVSMPDFDVDFDER
RRGEVIRYVTEKYGDERVAQIVTYGTIKAKQALKDSSRVLGFPFGMGEKLTKAMPPAVMG
KDIPLSGILDRDHARYKEAGDIRALIETDPEAKTVFETALGLENLKRQWGVHAAGVIMSS
EPLIDIIPIMKREQDGQIVTQFDYPACESLGLIKMDFLGLRNLTIIDDALDNIEANRGFR
PVLEDLALDDPAAYELLSRGDTLGVFQLDGGPMRSLLRQMKPDNFEDISAVIALYRPGPM
GANSHTNYALRKNGLQEITPIHPEFEEPLKDILDTSYGLIIYQEQVMAIAQRVAGFSLGQ
ADILRRAMGKKKKSELDKQYEGFSGGMKANGFSDAAIQKLWEILLPFSDYAFNKAHSAAY
GVLSYWTAYLKAHYPAEYMAALLTSVGDARDKLALYLNECRRMGIQVLPPDVNESIGYFA
AVGDDIRFGLGAVRNVGFNVVDAIRAAREAKGRFESFHDFLKKVPTQVANKRTVESLVKA
GAFDSLGHTRRALVEIHEGAVEAAVKEKRAEENGDVGFDFDSLFEDHEKDAAPSPVPDRP
EWAKRDKLAFEREMLGLYVSDHPLAGLEATLAKHASTSITDLMSSDATQDGDVATIAGLV
TSVQHRVARQSGNQYGMIQVEDFSGEITVMFMGKAYQEFAPALQGDSIVVVRGRVSLRDD
GMNLHAYSVFEPEVGQGDESGPVMISLPDVRATTETIQALGDVLIRHRGGTEVRLKLTKG
RTARVFELPYPVAVSADFYGELKSLLGPNCLA
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
gtggccgcggattccttcgtccacctgcacgtgcattccgagtactcgatgctcgacgga
gccgcccgcgtcggggagctgatgaaggccgcggcggccgagggcatgccggcggtcgcg
atgaccgaccacggcaacgtgttcggtgcgttcgacttctggaagcaggcgacggatgcc
ggggtcaagcccatcatcggcaccgaggcgtacctgaccccgggcacccaccggagcgac
aagacccgggtccggtggggcaacggcggtggagacgacgtgtcgggcgccggcgcctac
acgcacatgacgctgctctccgagaccaacgagggcatgcacaacctattccggctctcg
agccgcgcgtcgatcgagggctactacttcaagccgcgcatggaccgcgagctcctccag
acctattccaaggggctcatcgcgaccaccgggtgcccgtcgggcgaggtgcagacgagg
ctccgcctcgggcagtacgacgaggccgtcgcggccgccgccgagttccgcgacatcttc
gggcgtgagaacttcttcgccgagatcatggaccacggcctgggcatcgagaagcggatc
atggacgacctgctgcggctcgccaggcagctcgacctcccgctcgtggccaccaacgac
ctgcactacacccacgcccacgacgccaagagccacgcggcgctcctgtgcgtgcagtcg
ggatcgacgctcgacgacccgaaccgcttcaagttcgacgccgacgagttctacctgaag
tcggccgccgagatgcgacacctcttccgcgaccacccggaggcgtgcgacaacacgctg
ctcatcgcggagcgatgcgacgtgcagttcaacacgaacgcgaactacatgccgcgcttc
cccgtgcccgagggtgaggacgagcagagctggttcgtcaaggaggtcgagcgcgggctg
cacgagcgctacccgggcgggatccccgacgaggtccggaagcaggccgactacgaggtc
ggggtcatcagccagatgggcttcccgggctacttcctcgtggtcgccgacttcatcaac
tggtccaagcgcaacggcatccgagtgggcccgggccgcggctcgggtgccggatcgatg
gcggcgtacgccatgaagatcaccgacctcgacccgctccagcacggcctcatcttcgag
cgtttcctgaaccccgaccgcgtctcgatgcccgacttcgacgtcgacttcgacgagcgt
cgtcgcggcgaggtcatcaggtacgtgaccgagaagtacggcgacgagcgcgtggcgcag
atcgtcacgtacggcacgatcaaggccaagcaggcactgaaggactccagtcgcgtgctc
gggttccccttcggcatgggcgagaagctgacgaaggcgatgccgcccgcggtgatgggc
aaggacatcccgctctcgggcatcctcgaccgggaccacgcccgctacaaggaggcgggc
gacatccgcgccctcatcgagaccgaccccgaggcgaagaccgtcttcgagaccgcgctg
ggcctggagaacctcaagcgccagtggggggtgcacgccgcaggcgtgatcatgtcgagc
gagccgctcatcgacatcatcccgatcatgaagcgcgaacaggacggccagatcgtcacc
cagttcgactatccggcgtgcgagtcgctcggcctgatcaagatggacttcctggggctg
cgcaacctcacgatcatcgacgacgcgctcgacaacatcgaggccaaccgcgggttccga
cccgtgctcgaagacctggcgctcgacgaccccgcggcctacgaactgctctcgcgcggc
gacacgctcggggtgttccagctcgacggcggcccgatgcgctcgctcctgcggcagatg
aagcccgacaacttcgaggacatctcggccgtcatcgcgctgtaccgcccggggccgatg
ggtgcgaactcgcacaccaactacgcgctccgcaagaacgggctgcaggagatcacgccg
atccacccggagttcgaggagccgctgaaggacatcctcgacaccagctacggcctgatc
atctaccaggagcaggtcatggcgatcgcccagcgcgtcgccggcttctcgctcggccag
gccgacatcctccgacgggcgatgggcaagaagaagaagtccgagctcgacaagcagtac
gagggcttctccggcggcatgaaggccaacggcttctcggatgccgcgatccagaagctc
tgggagatcctgctgccgttctccgactacgcgttcaacaaggcccactcggccgcctac
ggcgtgctcagctactggaccgcgtacctcaaggcgcactacccggcggagtacatggcc
gcactgctcacgagcgtgggcgatgcacgcgacaagctcgcgctgtacctcaacgagtgc
cgtcggatgggcatccaggtgcttccccccgacgtcaacgaatcgatcgggtacttcgcc
gccgtcggcgacgacatccgcttcggcctcggtgcggtgcgcaacgtcggcttcaacgtc
gtcgacgcgatccgcgccgcacgcgaggcgaaggggcgcttcgagagcttccacgacttc
ctgaagaaggtgccgacgcaggtcgcgaacaagcggacggtcgagtcgctcgtgaaggcg
ggcgcgttcgactcgctcgggcacacgcgccgcgcgctcgtcgagatccacgagggcgcg
gtcgaagcggccgtcaaggagaagcgagctgaagagaacggcgatgtcgggttcgatttc
gacagcctgttcgaggatcacgagaaggatgccgcgccgtcgcccgtgcccgaccggccc
gagtgggccaagcgcgacaagctcgccttcgagcgcgagatgctggggctctacgtctcc
gaccatccgctcgccggtctcgaggcgacgctcgccaagcacgcgtcgacctcgatcacc
gacctgatgagctcggatgcgacgcaggacggcgacgtcgcgacgatcgcagggctcgtc
acgagcgtccagcatcgggtggcgcgccagtcgggcaaccagtacggcatgatccaggtc
gaggacttctcgggcgagatcaccgtcatgttcatgggcaaggcctaccaggagttcgcc
ccggccctgcagggcgactcgatcgtcgtcgtgcgcggtcgggtcagcctgcgcgacgat
ggcatgaacctgcacgcgtacagcgtgttcgagcccgaggtcggccagggcgatgagagc
gggccggtcatgatctcgcttcccgacgtgcgcgcgacgaccgagaccatccaggcgctc
ggcgacgtgctcatccgccaccgcggcggcaccgaggtgcgtctgaagctcaccaagggt
cgcaccgcccgggtcttcgaactgccataccccgtggccgtgagcgccgacttctacggc
gaactcaagagcctgctcgggccgaactgcctcgcatga
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