Agromyces marinus: DSM26151_16720
Help
Entry
DSM26151_16720 CDS
T08161
Symbol
rnd
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
amau
Agromyces marinus
Brite
KEGG Orthology (KO) [BR:
amau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amau03016
]
DSM26151_16720 (rnd)
Enzymes [BR:
amau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
DSM26151_16720 (rnd)
Transfer RNA biogenesis [BR:
amau03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
DSM26151_16720 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
ThrE
Motif
Other DBs
NCBI-ProteinID:
UIP58787
LinkDB
All DBs
Position
1789103..1790299
Genome browser
AA seq
398 aa
AA seq
DB search
MADVFHVIDSRNAYDDAVAALAGGVGPVAVDAERASGFRYSQRAYLIQVFRREAGTFLFD
PTGIDDFTSLHDAIRDEEWVLHAASQDLACLREVGLDPVGIFDTELAARLLGMPRVGLAT
VVEELLGIRLAKEHSAADWSTRPLPQSWLKYAALDVELLVDVRDRLAERLDEAGKAEIAR
QEFEATVHREAKPPAAEPWRRLSGIHALRSPRNLSVARALWQARDALAAETDVAPGRLVP
DASLLAVAKALPESKRALADLKAFNGRASRTELDRWWAAIEAARTADPPATRVPSDAPPP
PRAWAARNPEADARLRLAKASVVEAAEALGMPVENLLTPDHLRRLAWTPPEEDGPDAIGQ
ALLDLGARAWQVEATSQRIAVAFVQATQSLEDAAHEHS
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
gtggctgacgttttccacgtgatcgactcccgcaacgcctacgacgatgccgtcgcggcg
ctcgcgggcggcgtcggcccggtcgccgtcgacgcggagcgggcgagcgggttccggtac
tcgcagcgcgcctacctgatccaggtgttccggcgcgaggccggcacgttcctgttcgac
cccaccggaatcgacgacttcacgagcctccacgacgcgatccgcgacgaggaatgggtc
ctgcacgcggcgagccaggacctcgcgtgcctgcgcgaggtcgggctcgacccggtcggg
atcttcgacacggaactcgcggctcgcctgctcgggatgccgcgcgtcgggctcgcgacc
gtggtcgaggaactgctcggcatccgcctggcgaaggagcactccgcggccgactggtcg
acgcggccactgccccagtcgtggttgaagtacgccgcactcgacgtcgagctcctcgtc
gacgtgcgcgaccggcttgcggaacgcctcgacgaggcgggcaaggccgagatcgcccga
caggagttcgaggcgaccgtgcaccgtgaggccaagcctcccgcggcagagccgtggcgg
cgcctgagcggcatccacgccctgcgttcgccccgcaacctctccgtcgcgcgtgcgctc
tggcaggcgcgcgacgccctggcggccgagacggatgtcgcgcccggacgcctcgtgccc
gatgcgtcgctgctcgcggtcgcgaaggcgctgcccgagtccaagcgcgcactcgcggac
ctcaaggcgttcaacggccgcgcgagccgcaccgaactcgatcgctggtgggcggccatc
gaagccgcgcggacggccgatccgcccgcgacgcgggtgccgagcgatgctcctccgccg
ccacgcgcgtgggctgcgcgcaatccggaggccgacgcgcgactgcgcctcgcgaaggcc
tcggtcgtcgaggcggccgaggcgttgggcatgccggtcgagaacctgctcacgcccgac
cacctgcgccggctcgcgtggactccgccggaggaggacgggcccgacgcgatcgggcag
gcgctcctcgatctcggggcacgggcgtggcaggttgaggcaacctcacagagaatcgcc
gtggcgtttgtacaggcgacacaatcgctcgaagacgccgcgcacgagcattcgtag
DBGET
integrated database retrieval system