KEGG   Agromyces marinus: DSM26151_16720
Entry
DSM26151_16720    CDS       T08161                                 
Symbol
rnd
Name
(GenBank) Ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
amau  Agromyces marinus
Brite
KEGG Orthology (KO) [BR:amau00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:amau03016]
    DSM26151_16720 (rnd)
Enzymes [BR:amau01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     DSM26151_16720 (rnd)
Transfer RNA biogenesis [BR:amau03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    DSM26151_16720 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 DNA_pol_A_exoN HRDC ThrE
Other DBs
NCBI-ProteinID: UIP58787
LinkDB
Position
1789103..1790299
AA seq 398 aa
MADVFHVIDSRNAYDDAVAALAGGVGPVAVDAERASGFRYSQRAYLIQVFRREAGTFLFD
PTGIDDFTSLHDAIRDEEWVLHAASQDLACLREVGLDPVGIFDTELAARLLGMPRVGLAT
VVEELLGIRLAKEHSAADWSTRPLPQSWLKYAALDVELLVDVRDRLAERLDEAGKAEIAR
QEFEATVHREAKPPAAEPWRRLSGIHALRSPRNLSVARALWQARDALAAETDVAPGRLVP
DASLLAVAKALPESKRALADLKAFNGRASRTELDRWWAAIEAARTADPPATRVPSDAPPP
PRAWAARNPEADARLRLAKASVVEAAEALGMPVENLLTPDHLRRLAWTPPEEDGPDAIGQ
ALLDLGARAWQVEATSQRIAVAFVQATQSLEDAAHEHS
NT seq 1197 nt   +upstreamnt  +downstreamnt
gtggctgacgttttccacgtgatcgactcccgcaacgcctacgacgatgccgtcgcggcg
ctcgcgggcggcgtcggcccggtcgccgtcgacgcggagcgggcgagcgggttccggtac
tcgcagcgcgcctacctgatccaggtgttccggcgcgaggccggcacgttcctgttcgac
cccaccggaatcgacgacttcacgagcctccacgacgcgatccgcgacgaggaatgggtc
ctgcacgcggcgagccaggacctcgcgtgcctgcgcgaggtcgggctcgacccggtcggg
atcttcgacacggaactcgcggctcgcctgctcgggatgccgcgcgtcgggctcgcgacc
gtggtcgaggaactgctcggcatccgcctggcgaaggagcactccgcggccgactggtcg
acgcggccactgccccagtcgtggttgaagtacgccgcactcgacgtcgagctcctcgtc
gacgtgcgcgaccggcttgcggaacgcctcgacgaggcgggcaaggccgagatcgcccga
caggagttcgaggcgaccgtgcaccgtgaggccaagcctcccgcggcagagccgtggcgg
cgcctgagcggcatccacgccctgcgttcgccccgcaacctctccgtcgcgcgtgcgctc
tggcaggcgcgcgacgccctggcggccgagacggatgtcgcgcccggacgcctcgtgccc
gatgcgtcgctgctcgcggtcgcgaaggcgctgcccgagtccaagcgcgcactcgcggac
ctcaaggcgttcaacggccgcgcgagccgcaccgaactcgatcgctggtgggcggccatc
gaagccgcgcggacggccgatccgcccgcgacgcgggtgccgagcgatgctcctccgccg
ccacgcgcgtgggctgcgcgcaatccggaggccgacgcgcgactgcgcctcgcgaaggcc
tcggtcgtcgaggcggccgaggcgttgggcatgccggtcgagaacctgctcacgcccgac
cacctgcgccggctcgcgtggactccgccggaggaggacgggcccgacgcgatcgggcag
gcgctcctcgatctcggggcacgggcgtggcaggttgaggcaacctcacagagaatcgcc
gtggcgtttgtacaggcgacacaatcgctcgaagacgccgcgcacgagcattcgtag

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