Agromyces marinus: DSM26151_19470
Help
Entry
DSM26151_19470 CDS
T08161
Symbol
rep
Name
(GenBank) ATP-dependent DNA helicase Rep
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amau
Agromyces marinus
Pathway
amau03420
Nucleotide excision repair
amau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSM26151_19470 (rep)
03430 Mismatch repair
DSM26151_19470 (rep)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amau03400
]
DSM26151_19470 (rep)
Enzymes [BR:
amau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM26151_19470 (rep)
DNA repair and recombination proteins [BR:
amau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSM26151_19470 (rep)
MMR (mismatch excision repair)
Other MMR factors
DSM26151_19470 (rep)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
UIP59052
LinkDB
All DBs
Position
complement(2084714..2088058)
Genome browser
AA seq
1114 aa
AA seq
DB search
MSPARIGADEIAARLGLHPPTPEQRAVIEADPTGRSIVVAGAGSGKTETMANRVVWLLAN
GAVDVPEVLGLTFTRKAAGELAERVRERVAQLVAEGIAEVRLDPLESAAVFTYNAFAGAI
HREHAMRIGREPDATILGEAAAWQLARSIVSDAADPRLVELDASLDRVTGAVLSLSRALA
ENVTDSRDVRAFARDFLAMHDLPIEAPRKRTPFDSFTSALGVVEALPPLLELADAYAAEK
QRRGVVEFSDQVALALQICTAHPEVAAEHRERYATVLLDEYQDTSVVQTRLLATLFRDHP
VMAVGDPDQSIYGWRGASAANLARFDGDFSSAGDAAAYDLSTSWRNPTIVLDAANTLIAP
LDGGIPKAPLRPSPFAEAGALEIRWSETIDEEAAAVADWLAERMRGAQRTGALLCRTFAH
VDLFATALRDRGVPVHVLGVAGLLDQPVVADLVCALRVVHDPTAGSELLRLLGGARWRIG
PADLAALGSVARWLAERDLATRRLADEVRRGIRGSIAPDESPSIVDALDFVLTAPDDHRA
LAALSAEGLARMRRAGAQLQSLRRRAGLGLVDFVTLVEHELLLDIEVAANPGQPLGAASL
EAFDDLVSGFADSAELPTLGAFLGWLLEAEQRDRLSPRQDDPEPGAVQVLSIHGSKGLEW
DVVAIPRMVDDELPSKPRSNRGWLSFGSLPGEFRGDRDEIPQLMWRGVQSQAEFDEAVKA
YAEENRERHADEERRLAYVGITRARRELLLTGSWWATQRSPRSPSPFLRELAVAGIVDAA
ALPAGPAEPENPRSSAAARVSWPLDPLGARRPAVVRAADAVREAASLPTGFGIGPTLADE
LRMLLEERRRRGRSRGGAGVPTRIPASRFKDYVDDPEAVAADLARPMPQRPYRATRIGTL
FHAWVEARSGGSTARPAGPAGADTPLDLDAFDVDVDGAGADEVLADPVEARLRRLRETFA
ASEWGDRRPTAVELELHLPLDGQVFVSKLDAVYDVDPGSPDGRRGIRAQVVDWKTGAAPR
DARELELRQTQLALYRLAYARWSGLDPEVIDAVFYYVEDDVVLRPDALYDEAELRRAWAG
VRGRTGAGRNETHETDTGEGAPVPREVRSAIAAS
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgagcccggcacgcatcggcgccgacgagatcgccgcacgactcggcctgcacccgccc
accccggaacagcgtgccgtcatcgaggccgaccccaccgggcggagcatcgtcgtggcg
ggcgcgggcagcggcaagaccgagacgatggccaaccgcgtcgtctggctgctcgcgaac
ggcgcggtcgacgtgcccgaggtgctcggactcaccttcaccaggaaggcggcgggcgaa
ctcgccgagcgggtccgggaacgcgtggcgcagctcgtcgccgagggcatcgccgaggtg
cgactcgatccgctcgaatccgctgcggtgttcacctacaacgcgttcgccggcgcgatc
caccgcgagcacgcgatgcgcatcggccgggaacccgacgcgacgatcctcggcgaggcc
gcggcgtggcagctcgcgcggagcatcgtctcggacgcggccgacccgaggctcgtcgag
ctcgatgcatcgctcgaccgggtgacgggcgcagtgctctcgctcagccgcgcgctcgcc
gagaacgtgaccgacagccgcgacgtgcgcgcgttcgcgcgggacttcctcgccatgcac
gacctgcccatcgaggcgccgcgcaagcgcaccccgttcgactcgttcacctcggcgctc
ggcgtcgtcgaggcgctgccgcccctgctcgaactcgccgacgcgtacgcggccgagaag
cagcgccgcggcgtcgtggagttctccgaccaggtggccctcgcgctgcagatctgcacc
gcgcacccggaggtcgcggcggagcaccgcgagcgctacgcgacggtgctcctcgacgag
taccaggacaccagcgtggtgcagacgagactgctcgccacgctcttccgcgaccacccg
gtcatggcggtcggcgaccccgaccagtccatctacgggtggcggggcgccagcgccgcg
aacctcgcccggttcgacggcgacttctcctcggcgggcgacgcggccgcctacgacctc
tccacgagctggcgcaaccccaccatcgtgctcgacgcggcgaacacgctcatcgcgccg
ctcgacggcggcatcccgaaggcgccgctgcggccctcgccgttcgccgaggccggcgcg
ctcgagatccgctggtccgagaccatcgacgaggaggcggccgcggtcgccgactggctc
gccgagcggatgcgcggcgcgcagcgcaccggcgcactgctgtgccggaccttcgcgcac
gtcgacctgttcgcgaccgcgctgcgcgaccgcggcgtcccggtccacgtgctcggggtc
gccgggctcctcgaccagcccgtcgtcgccgacctcgtgtgcgcgctgcgcgtggtgcac
gacccgaccgcggggtccgagctcctgcggctgctcggcggtgccaggtggcggatcggg
ccggcggacctggccgcgctcggctcggtcgcgcgatggctcgccgagcgcgacctcgcg
acccggcgcctcgccgacgaggttcgccgtggcatccgcgggtcgatcgcgcccgacgag
tcgccgtcgatcgtcgacgcgctcgacttcgtcctcaccgcacccgacgaccatcgcgcc
ctcgcagccctgagcgccgagggcctcgcccgcatgcgtcgggccggggcgcagctgcag
tccctgcgccgtcgtgccgggctcggactggtggacttcgtgaccctcgtcgagcacgag
ctgctgctcgacatcgaggtcgccgcgaaccccggtcagccgctcggtgcggccagcctc
gaagcgttcgacgacctcgtctcgggcttcgcggactccgccgagcttccgaccctcggg
gccttcctcgggtggctgctcgaagccgagcagcgcgaccggttgagcccccgacaggac
gaccccgagccgggagccgtccaggtgctctcgatccacgggtcgaaggggctcgaatgg
gatgtggtggccatcccgcggatggtcgacgacgagctgccctcgaagccgcggagcaac
cgcggctggctctcgttcgggtcgctcccgggcgagttccgcggcgaccgcgacgagatc
ccgcagctcatgtggcgcggcgtgcagagccaggccgagttcgacgaggccgtgaaggcc
tacgccgaggagaaccgggaacggcacgccgacgaggaacgcagactcgcgtacgtcggg
atcacccgggcgcgccgcgaactgctgctcaccggatcctggtgggccacgcagcggtcg
ccgagatcgccgagcccgttcctgcgcgagctcgcggtcgccggaatcgtcgacgcagcc
gcgctaccggccgggcccgccgaacccgagaacccgcgatcgtcggccgcggcccgggtg
agctggccgctcgacccgctgggcgcgcgcaggccggcggtcgtccgcgcggcggacgcc
gtccgcgaggcggcgagcctgccgaccgggttcggcatcggtccgaccctcgccgacgaa
ctgcggatgctcctcgaggagcgccgacgccgcgggcgttcgcgcggcggagccggcgtg
ccgacgcgcatcccggcatcccggttcaaggactacgtcgacgaccccgaggccgtcgcg
gcagacctggcgcgaccgatgccgcaacggccctaccgagcgacccggatcggcaccctg
ttccacgcgtgggtcgaagcgcgttcgggcggctcgacggcgcgtcctgccggtccggcg
ggcgccgacactccgctcgacctcgacgcattcgatgtcgacgtcgacggtgcgggggcc
gacgaggtgctggccgatcccgtcgaggcgcgcctgcggcgcctgcgcgagaccttcgcg
gcctcggagtggggcgatcgccgcccgaccgcggtcgagctcgaactgcacctcccgctc
gacggccaggtgttcgtcagcaagctcgacgcggtgtacgacgtcgacccggggagtccc
gacggtcgtcgcggcatccgggcccaggtcgtcgactggaagaccggagcggccccgcgc
gacgcacgcgagctcgagctccggcagacgcagctcgcgctgtaccggctcgcctacgcg
cgctggtccggactcgaccccgaggtgatcgatgcggtgttctactacgtcgaggacgac
gtcgtgctgcggcccgacgcgctgtacgacgaggccgaactgcggcgcgcctgggcgggc
gtgcgcgggcgcaccggagcgggccggaacgagacgcacgagaccgacacgggtgagggc
gcacccgttccgcgcgaggtgcggtcggcgatcgcggcgagctga
DBGET
integrated database retrieval system
