Agromyces marinus: DSM26151_22810
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Entry
DSM26151_22810 CDS
T08161
Symbol
uvrD1
Name
(GenBank) ATP-dependent DNA helicase UvrD1
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amau
Agromyces marinus
Pathway
amau03420
Nucleotide excision repair
amau03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DSM26151_22810 (uvrD1)
03430 Mismatch repair
DSM26151_22810 (uvrD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amau03400
]
DSM26151_22810 (uvrD1)
Enzymes [BR:
amau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DSM26151_22810 (uvrD1)
DNA repair and recombination proteins [BR:
amau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DSM26151_22810 (uvrD1)
MMR (mismatch excision repair)
Other MMR factors
DSM26151_22810 (uvrD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
AAA_11
ResIII
PAC4
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UIP59374
LinkDB
All DBs
Position
complement(2460762..2463245)
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AA seq
827 aa
AA seq
DB search
MTLILDPDDPTGWREAPGAAPDAHAGPAASAHLTAGLNPQQREAVEYRGPALLIVAGAGS
GKTRVLTHRIASLIDAREAWPSQILAITFTNKAAAEMRERVEALLGEAAGGMWISTFHSA
CVRILRREAESIGLSSTFTIYDSADQRTILKRIIKELDADTLGFTPASAQAKISKLKNEL
ADVETYARNVNSNDPNEVMFLEIFRQYTRRLRDASALDFDDLISETVYLFRAFPKVAALY
QRRFRHILVDEYQDTNHAQYSLIRELTRAVEPDVVAELNEHGVLVRGLTDASGSIPGASL
TVVGDSDQSIYAFRGADIRNIVEFERDFPGAKVVLLEQNYRSTQNILSAANAVISNNFDR
KDKKLWTADGDGEKITGYTGYSAHDEAQFVADEIEALHRAGVAYRDIAVFYRTNAQTRAL
EEIFVRSALPYRVVGGTKFYERAEIKDAMAYLVAVANPLDELAIRRILNTPKRGIGPATE
TSIASFAEANDLTFRQAMRAADGLGLGPKATTAIQGLAKLLDEAAAMLVPSEQGIAEGTN
AGAAKVSDVLAFLIEGSKLVETLRTSRDPQDETRAENVEELLAQTKDFDRENPGASLVDF
LTQVSLVAAADELDDASGTVSLMTLHTAKGLEYHAVFLTGLEEGLLPHQMSASEPGGPAE
ERRLFYVGITRARKRLYLSLAMSRAQFGEVSVAMPSRYLQEIPDELVDWRQSPGMANGRG
GSQPRALNARRGGAGGGAWGTRDRDLERFSVTKSAAPKTEWANRVTGTVRDNGDLTLAAG
DRIRHTDFGEGTVRQVTGEGTKRIAHVGFDTAGQKKLLIKIAPIEKL
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgatcctcgaccccgacgacccgaccggctggcgcgaggcgcccggcgcggcc
cccgacgcgcacgccggccccgcggcatccgctcacctcacggcggggctgaacccgcag
cagcgggaggccgtcgagtaccgcggcccggccctgctcatcgtcgcgggcgcgggctcc
ggcaagacgcgagtgctcacccaccggatcgcgagcctgatcgacgcgcgcgaggcgtgg
ccgagccagatcctcgcgatcacgttcacgaacaaggcggcggccgagatgcgcgagcgc
gtcgaggcgctgctcggcgaggcggccggcggcatgtggatctcgaccttccactcggcg
tgcgtgcggatcctgcgccgcgaggccgagtcgatcgggctgtcgagcaccttcacgatc
tacgactcggccgaccagcgcacgatcctgaagcgcatcatcaaggagctcgatgccgac
acgctcggcttcacgcccgcgagcgcgcaggcgaagatctccaagctcaagaacgagctc
gccgacgtcgagacgtacgcgcgcaacgtcaactcgaacgacccgaacgaggtgatgttc
ctcgagatcttccggcagtacacgcggcggctgcgcgacgcgagcgcgctcgacttcgac
gacctcatcagcgagaccgtctacctgttccgtgccttcccgaaggtcgcggcgctctac
cagcggcggttccgccacatcctcgtcgacgagtaccaggacaccaaccacgcccagtac
tcgctcatccgcgagctgacgcgcgccgtcgaacccgacgtcgtcgccgagctgaacgag
cacggcgtgctcgtgcgggggctgacggatgcctcggggtcgatccccggcgcgagcctg
acggtcgtcggcgactccgaccagtcgatctacgctttccgcggcgccgacatccgcaac
atcgtcgagttcgagcgcgacttcccaggtgcgaaggtcgtgctgctcgagcagaactac
cggtcgacccagaacatcctctcggccgccaacgccgtcatctcgaacaacttcgaccgg
aaggacaagaagctctggacggccgacggcgacggcgagaagatcacgggctacaccggg
tactcggcgcacgatgaggcgcagttcgtcgccgacgagatcgaggcgctgcaccgcgct
ggcgtcgcgtaccgcgacatcgccgtgttctaccgcaccaatgcgcagactcgcgcgctg
gaggagatcttcgtgcgctcggcgctgccgtaccgcgtggtcggcggcacgaagttctac
gaacgtgccgagatcaaggacgcgatggcctacctcgtcgcggtcgcgaacccgctcgac
gaactcgccatccggcgcatcctgaacacgcccaagcgcggcatcgggccggcgaccgag
acctccatcgcgagcttcgccgaggcgaacgacctcacgttccggcaggcgatgcgggcc
gccgacgggctcgggctcgggcccaaggccacgacggccatccagggcctcgcgaagctc
ctcgacgaggctgccgcgatgctcgtgccgagcgagcagggcatcgccgagggcaccaac
gcgggcgcagcgaaggtgtccgacgtgctcgcgttcctcatcgaggggtcgaagctcgtc
gagacgctgcgcacgagccgcgacccgcaagacgagacgcgcgccgagaacgtcgaggaa
ctgctcgcgcagaccaaggacttcgatcgtgagaacccgggcgcgagcctcgtcgacttc
ctcacccaggtctcgctcgtcgcggcggccgacgaactcgacgacgcgtcgggcaccgtc
tcgctcatgacgctgcacaccgcgaaggggctcgagtaccacgccgtcttcctcaccggg
ctcgaagagggactgctgccgcaccagatgtcggcctccgaacccggcgggccggctgag
gagcgccgcctgttctacgtcggcatcacgcgcgcgcgcaagcgcctctacctgtcgctc
gcgatgagccgagcccagttcggcgaggtgtcggtcgcgatgccgagccgctacctgcag
gagatccccgacgagctcgtcgactggcggcagtcgcccggcatggccaacggtcgcggc
ggttcccagccgcgcgcgctcaacgcgcgccgcggcggcgcgggcggcggcgcgtgggga
acccgcgaccgagacctcgagcgattcagcgtcacgaagtcggccgcgccgaagaccgag
tgggccaaccgggtcaccggcaccgtgcgcgacaacggcgatctcaccctcgcagcgggc
gaccggatccggcacaccgacttcggcgagggcacggtgcgtcaggtcaccggcgagggc
accaagcgcatcgcgcacgtcggattcgacaccgccgggcagaagaagctcctcatcaag
atcgcgccgatcgagaagctctga
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