Agromyces marinus: DSM26151_27610
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Entry
DSM26151_27610 CDS
T08161
Symbol
ydcS
Name
(GenBank) Bifunctional polyhydroxybutyrate synthase / ABC transporter periplasmic binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
amau
Agromyces marinus
Pathway
amau02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amau00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
DSM26151_27610 (ydcS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amau02000
]
DSM26151_27610 (ydcS)
Transporters [BR:
amau02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
DSM26151_27610 (ydcS)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
UIP59847
LinkDB
All DBs
Position
complement(2922630..2923811)
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AA seq
393 aa
AA seq
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MRSRLTVGAAAVSVAVLALTGCAAAGDEGSASGELVIDVPDVPMHEELGDYEGSVDIVAW
SGFVEPAWSDAFTEDTGCVVNRRVAGTSDEMVQLMRTGDYDLVSASGDASLRLIAGGDVA
PLNLDLIPNFGDDIVEGMKGQLYDTINGKSYGVPIGRGANILQYNSEVVTEEPTSWSVAW
EADSPYAGEVIAYDAPIYIADAAVYLMAHEPELGIENPYALDQEQLDAAIELLKQQNGIV
SEYWADPAAQITSFVGGNTVLGTSWEVLRKLTEDDAFKSVLPEEGSTGWSDAWMLSAESD
SPNCAYAWMDYTSSPEVNGAIAMNFGMAPANAAFCELDDAAQAHCDYYNATDEEYFSKVW
FWTTPIEQCIDGRTDVRCTNFQEWTDAWLQVKG
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgagaagcagactcaccgtcggcgccgccgccgtcagcgtcgccgtactcgcactcacc
ggctgcgcagcagcgggcgacgagggcagcgcgagcggcgaactcgtcatcgacgtcccc
gacgtcccgatgcacgaggaactcggcgactacgagggctcggtcgacatcgtcgcctgg
agcggcttcgtcgagcccgcctggtccgacgccttcaccgaggacaccggctgcgtcgtg
aaccggcgcgtggcgggcaccagcgacgagatggtccagctgatgcgcacgggcgactac
gacctggtctcggcatccggcgacgccagcctccgcctcatcgcgggcggcgatgtcgcc
ccgctgaacctcgacctcatcccgaacttcggcgacgacatcgtcgagggcatgaaggga
cagctgtacgacaccatcaacggcaagtcgtacggcgtgccgatcgggcgcggcgccaac
atcctccagtacaacagcgaggtcgtcaccgaggagcccacgagctggtcggtcgcctgg
gaggccgacagcccctacgcgggcgaggtcatcgcctacgacgcgccgatctacatcgcc
gacgcggccgtgtacctcatggcgcacgagcccgagctcggcatcgagaacccgtacgcg
ctcgaccaggagcagctggacgccgcgatcgaactcctcaagcagcagaacggcatcgtc
tccgagtactgggccgaccccgcggcccagatcacctcgttcgtcggagggaacaccgtg
ctcggcacgtcgtgggaggtgctccggaagctcaccgaggacgacgcgttcaagagcgtc
ctgccggaagagggctcgaccggatggtcggacgcctggatgctctccgccgagtcggac
agcccgaactgcgcctacgcgtggatggactacacgagttcccccgaggtcaacggcgcg
atcgcgatgaacttcgggatggccccggcgaacgccgcgttctgcgagctcgacgatgcg
gcgcaggcgcactgcgactactacaacgccaccgacgaggagtacttctcgaaggtctgg
ttctggaccacgccgatcgagcagtgcatcgacggccgcaccgacgtccggtgcaccaac
ttccaggaatggaccgacgcctggctgcaggtcaagggctga
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