Agromyces mangrovi: GCM10025877_00360
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Entry
GCM10025877_00360 CDS
T09181
Symbol
ruvB_1
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
amav
Agromyces mangrovi
Pathway
amav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GCM10025877_00360 (ruvB_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amav03400
]
GCM10025877_00360 (ruvB_1)
Enzymes [BR:
amav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM10025877_00360 (ruvB_1)
DNA repair and recombination proteins [BR:
amav03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GCM10025877_00360 (ruvB_1)
RecFOR pathway proteins
GCM10025877_00360 (ruvB_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
AAA_16
Mg_chelatase
AAA_22
Zeta_toxin
MCM
IstB_IS21
nSTAND3
Sigma54_activ_2
AAA_14
NB-ARC
AAA_18
AAA_25
Rad17
NTPase_1
AAA_24
RNA_helicase
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
BDZ63098
LinkDB
All DBs
Position
complement(38213..39244)
Genome browser
AA seq
343 aa
AA seq
DB search
MSDPGVDLTSPELANEAELAFEGALRPRSLGEFVGQPRVRGQLQLLLTAAQMQQRTPDHI
LLAGPPGLGKTTLAMIVAHEGGRPLRMSSGPAIQHAGDLAAILSSLVPGEVLFIDEIHRM
ARSAEEMLYLAMEDFRIDIMVGKGAGATSVPLDLAPFTLVGATTRSGLLPNPLRDRFGFT
AHLEFYGEDELREVLGRAAAMLGLDVDGEALAEIAGRCRGTPRIANRLLRRVRDYALVHG
GRADLDAVRAALELYDVDELGLDRLDRAVIEAILTRFGGGPVGLNTLAVSVGEEAETIES
VVEPFLVRIGLLTRTPRGRVASPAAWRHLGLSSPAAGLPLDDL
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgaccccggcgtcgacctgacgagccccgagctcgcgaacgaggccgagctggcc
ttcgagggcgcactccggccgcgcagcctcggcgagttcgtcggccagccgcgcgtgcgc
ggccagctccaactgctgctcaccgccgcgcagatgcagcagcgcacgcccgaccacatc
ctgctggccggcccgccggggctgggcaagacgacgctcgccatgatcgtcgcccacgag
ggtggccggccgctccgcatgtcgagcggcccggcgatccagcacgcgggcgacctcgcg
gcgatcctgtcgtcgctcgtgcccggcgaggtgctgttcatcgacgagatccatcgcatg
gcgcgctcggccgaggagatgctgtacctcgcgatggaggacttccgcatcgacatcatg
gtcgggaagggcgccggcgcgacgagcgtcccgctcgacctggcgccgttcacgctcgtc
ggagcgaccacccgatccggcctgctgccgaatccgctgcgcgaccggttcggattcacc
gcgcacctcgagttctacggcgaggacgagctgcgcgaggtgctcggccgcgcggcggcc
atgctcgggctcgacgtcgacggcgaggcgctggccgagatcgccggacgctgccgcggc
acgccgcgcatcgcgaaccggctgctccgacgcgtgcgcgactacgcgctcgtgcacggc
gggcgcgccgacctcgacgccgtgcgcgcggcgctggagctctacgacgtcgacgagctc
ggcctcgaccggctcgaccgcgcggtcatcgaggcgatcctcacgcgcttcggcggcggg
cccgtcgggctgaacaccctcgcggtgtcggtcggcgaggaggccgagaccatcgagtcg
gtggtcgagccgttcctggtgcgcatcggcctgctcacccgcacgccgcgcgggcgcgtg
gcgagtcccgccgcgtggcggcacctcggtctcagcagtcccgccgcagggctgccactc
gatgacctataa
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