Agromyces mangrovi: GCM10025877_00420
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Entry
GCM10025877_00420 CDS
T09181
Symbol
pdxS_1
Name
(GenBank) pyridoxal 5'-phosphate synthase subunit PdxS
KO
K06215
pyridoxal 5'-phosphate synthase pdxS subunit [EC:
4.3.3.6
]
Organism
amav
Agromyces mangrovi
Pathway
amav00750
Vitamin B6 metabolism
amav01100
Metabolic pathways
amav01240
Biosynthesis of cofactors
Module
amav_M00916
Pyridoxal phosphate biosynthesis, R5P + glyceraldehyde-3P + glutamine => pyridoxal-P
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00750 Vitamin B6 metabolism
GCM10025877_00420 (pdxS_1)
Enzymes [BR:
amav01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.3 Amine-lyases
4.3.3.6 pyridoxal 5'-phosphate synthase (glutamine hydrolysing)
GCM10025877_00420 (pdxS_1)
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Gene cluster
GFIT
Motif
Pfam:
SOR_SNZ
ThiG
Dus
His_biosynth
NMO
IGPS
TetR_C_27
IMPDH
NanE
Glu_synthase
Trp_syntA
DHO_dh
TMP-TENI
Motif
Other DBs
NCBI-ProteinID:
BDZ63104
LinkDB
All DBs
Position
complement(42525..43415)
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AA seq
296 aa
AA seq
DB search
MSTAEFGSSRVKRGLAEMLKGGVIMDVVTAEQARIAEDAGAVAVMALERVPADIRAQGGV
ARMSDPDLIEAIIAEVSIPVMAKARIGHFVEAQVLQALDVDYIDESEVLSPADYVNHIDK
WEFNTPFVCGATNLGEALRRINEGAAMIRSKGEAGTGDVSEATKHIRKITSEINALKSMT
KDELYVAAKELQAPYELVAEVAETGKLPVVLFTAGGVATPADAAMMMQLGADGVFVGSGI
FKSGNPEARAAAVVKATTFHDDPAVIAEASRGLGEAMVGINVGDLPAPHRLAERGW
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagcactgccgagttcggctcgagccgcgtcaagcgcgggctcgccgagatgctgaag
ggcggcgtgatcatggacgtcgtcacggccgagcaggcccgcatcgccgaggacgcgggc
gccgtcgccgtcatggcgctcgagcgcgtgccggccgacatccgcgcccagggcggcgtg
gcgcgtatgagcgatcccgacctcatcgaggcgatcatcgccgaggtctcgatccccgtc
atggcgaaggcccgcatcggccacttcgtcgaggcgcaggtgctccaggcgctcgacgtc
gactacatcgacgagtccgaggtgctctccccggccgactacgtgaaccacatcgacaag
tgggagttcaacacgcccttcgtctgcggcgcgaccaacctcggcgaggcgctccgacgc
atcaacgagggtgcggcgatgatccgctcgaagggcgaggccggcaccggcgacgtctcc
gaggcgaccaagcacatccgcaagatcacctccgagatcaacgcgctgaagtcgatgacg
aaggacgagctgtacgtcgcggcgaaggagctgcaggcgccgtacgagctcgtggccgag
gtcgccgagaccggcaagctccccgtcgtgctcttcaccgcgggcggcgtggccaccccg
gccgacgccgcgatgatgatgcagctcggcgccgacggcgtgttcgtcggttccggcatc
ttcaagtcgggcaaccccgaggcgcgcgccgcggccgtcgtcaaggccaccaccttccac
gacgacccggcggtcatcgccgaggcgtcgcgcgggctcggcgaggccatggtcggcatc
aacgtcggcgacctgcccgccccgcaccggctcgccgagcgcggctggtag
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