Agromyces mangrovi: GCM10025877_01650
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Entry
GCM10025877_01650 CDS
T09181
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
amav
Agromyces mangrovi
Pathway
amav02024
Quorum sensing
amav03060
Protein export
amav03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
GCM10025877_01650 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
GCM10025877_01650 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM10025877_01650 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
amav02044
]
GCM10025877_01650 (ffh)
Enzymes [BR:
amav01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
GCM10025877_01650 (ffh)
Secretion system [BR:
amav02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
GCM10025877_01650 (ffh)
Eukaryotic Sec-SRP protein
GCM10025877_01650 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
cobW
CbiA
AAA_22
nSTAND3
APS_kinase
Zeta_toxin
AAA_17
AAA_30
AAA_18
AAA_31
AAA_24
AAA_33
NPHP3_N
NTPase_1
NACHT
MobB
ArsA_ATPase
TsaE
AAA_26
6PF2K
Thymidylate_kin
AAA_16
ABC_tran
nSTAND_NTPase7
AAA
Lyase_catalyt
Motif
Other DBs
NCBI-ProteinID:
BDZ63227
LinkDB
All DBs
Position
complement(173333..174913)
Genome browser
AA seq
526 aa
AA seq
DB search
MATFGTLSDRLAETFKNLRTKGKLSASDVDGTVREIRRALLEADVALPVVKEFTATVRER
ALGDEVSRALNPAQQVVQIVNEELVGILGGQQRRLQFAKTPPTVIMLAGLQGAGKTTLAG
KLAKWLKKDGHTPMLVAADLQRPNAVNQLQVVGEQAGVTVYAPEPGNGVGDPVKVAKDAV
AQATRAQHDTVIIDTAGRLGVDAELMKQAANIRKATNPDEVLFVIDAMIGQDAVATAKAF
QEGVDFTGVVLSKLDGDARGGAALSVASVTGRPIIFASTGEGLDDFEPFHPDRMASRILD
LGDILTLIEQAQQAFDEEEAAKVAEKIASEQFTLDDFLKQMQQLRGAGNIKKMMGMLPGM
GSMKQQLDDFDEREIVHTEAIIQSMTPAERTNPKLLNGSRRLRIAKGSGMTVTDVNQLVQ
RFEQAAKMMKTVARGGTPQIPGMGPMPGGGGHGQGKRKKGGKKPQGSRSGNPAKRAAENA
AIAEGRSAAPSAAPTGSGFGLGGGGGAQGAPSEEELQALQKFLGRG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggctaccttcggaaccctgtccgaccgtcttgccgagacgttcaagaacctccgcacc
aagggcaagctgtccgcgtccgacgtcgacggcaccgtccgcgagatccgccgcgcgctg
ctcgaggccgacgtggcgctgcccgtcgtcaaggagttcaccgcgacggtgcgcgagcgc
gcgctcggcgacgaggtcagccgcgcgctgaaccccgcccagcaggtcgtgcagatcgtc
aacgaggagctcgtcggcatcctcggcggccagcagcgccgcctgcagttcgcgaagacc
ccgccgaccgtgatcatgctcgcgggcctccagggcgccggcaagaccacgctcgcgggc
aagctcgcgaagtggctcaagaaggacggccacacgccgatgctcgtggccgccgacctc
cagcgcccgaacgccgtcaaccagctccaggtggtcggcgagcaggccggcgtcaccgtg
tacgcccccgagcccggcaacggcgtcggcgacccggtgaaggtcgcgaaggacgccgtc
gcgcaggccacgcgcgcccagcacgacaccgtcatcatcgacaccgcgggtcgcctgggc
gtcgacgcggagctcatgaagcaggccgcgaacatccgcaaggcgacgaaccccgacgag
gtgctgttcgtcatcgacgcgatgatcggccaggacgcggtcgcgaccgcgaaggcgttc
caggagggcgtggacttcacgggcgtcgtgctctcgaagctcgacggcgacgcgcgcgga
ggcgccgcgctctccgtggcatccgtcaccggccgccccatcatcttcgcgtccaccggc
gagggcctcgacgacttcgagccgttccaccccgaccgcatggcgagccgcatcctcgac
ctcggcgacatcctcaccctcatcgagcaggcccagcaggccttcgacgaggaggaggcc
gcgaaggtcgccgagaagatcgcgagcgagcagttcacgctcgacgacttcctcaagcag
atgcagcagctgcgcggcgccggcaacatcaagaagatgatgggcatgctgcccggcatg
gggtcgatgaagcagcagctcgacgacttcgacgagcgcgagatcgtgcacaccgaggcg
atcatccagtcgatgaccccggccgagcggaccaacccgaagctgctcaacggctcgcgt
cgcctgcgcatcgcgaagggctcgggcatgaccgtgaccgacgtgaaccagctcgtgcag
cgcttcgagcaggccgcgaagatgatgaagaccgtcgcgcgcggcggcacgccgcagatc
ccgggcatgggtcccatgccgggcggcggcggccacggccagggcaagcgcaagaagggc
gggaagaagccgcagggttcgcgctcgggcaacccggccaagcgcgccgccgagaacgcc
gcgatcgcggagggccgctcggccgccccgtcggccgcgccgaccggctccggcttcggc
ctcggcggtggcggaggcgcacagggcgcgccgtcggaggaggagctgcaggcgctgcag
aagttcctcggtcgcggctga
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