Agromyces mangrovi: GCM10025877_03240
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Entry
GCM10025877_03240 CDS
T09181
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amav
Agromyces mangrovi
Pathway
amav03420
Nucleotide excision repair
amav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GCM10025877_03240
03430 Mismatch repair
GCM10025877_03240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amav03400
]
GCM10025877_03240
Enzymes [BR:
amav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM10025877_03240
DNA repair and recombination proteins [BR:
amav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GCM10025877_03240
MMR (mismatch excision repair)
Other MMR factors
GCM10025877_03240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BDZ63386
LinkDB
All DBs
Position
complement(342325..344763)
Genome browser
AA seq
812 aa
AA seq
DB search
MIGAREIAARLGLPAPTDEQCAVIEAPHRAQSLVVAGAGSGKTETMANRVVWLLANGHVA
VPEVLGLTFTRKAAGELAERISRRVGQLVHEGIARVELDLLDAAEVSTYNAFASAIYREH
AMRIGREPDAALLGEASAWQLARSVVLDSDDERLVELDQSADRITGAVLELSRGIAENVA
DPRDVRVMARQFLAMADLPTGSARKKTPYATFASAMQQVGGLPVLVDLAERFALEKRRRG
LLEFSDQVAFALEICTRHPEVVDAYRDRYGAVLLDEYQDTSVVQTRLLSTLFGGRSVMAV
GDPDQSIYGWRGASATNLARFGGDFGDADAPVYDLSTSWRNPRRVLDAANALLRPFLDDP
VVPKRALGAAPGAGEGAVELRWGETVEDEAAAVADWFAVRLRGGGRPPSAAMLCRTLKQV
DVFAEAFEARGVPFHVLGLAGLLDQPVIADLVSALRVLHDPSAGAELLRLLGGARWQVGA
ADLAGLAETARWLAARDHALQPLDDDVRARMRASVVAEEHASLVDALDFVVEAPAGHAAT
ARIGEEGLARMRAAGAQLMSLRRRAGLELADLVTLVQHELLLDIEVGANAAQPLGAPSLE
AFDELLAGFLDVSEQPTLGAFLGWLAEAEQRDRLAPGRTSPNRAPCRCSRCTAPRGSSGT
SSPCHAPSRTSCRRRRCRPRAGSPSASCRTSSRAIATSCPTSPGAACTTRSSSRRRRRST
RPRSVACTRRSSGGSPTWPSRAPGASCCSAGRGGRCRRARGGRARTCTSWWRPACSPRRR
CPARACTRRTRARAAGSARRGRSTRWARAGPG
NT seq
2439 nt
NT seq
+upstream
nt +downstream
nt
atgatcggcgcccgcgagatcgccgcgcgcctgggcctgcccgcaccgaccgacgagcag
tgcgccgtgatcgaggcgccgcaccgcgcgcagagcctcgtcgtggcgggcgccggcagc
ggcaagaccgagaccatggcgaaccgcgtcgtctggctgctcgcgaacgggcacgtcgcc
gtgcccgaggtgctcggcctcacgttcacgcgcaaggccgccggcgagctcgccgagcgc
atctcgcgccgcgtcggccaactggtgcacgagggcatcgcccgcgtcgagctcgacctg
ctcgacgccgccgaggtctcgacctacaacgccttcgcgagcgccatctaccgcgagcac
gccatgcgcatcgggcgcgagcccgacgcggcgctgctcggcgaggcatccgcctggcag
ctcgcccgcagcgtcgtgctcgacagcgacgacgagcgcctcgtcgagctcgaccagtcg
gccgaccgcatcaccggcgcggtgctggagctcagccgcggcatcgccgagaacgtggcc
gacccgcgcgacgtgcgggtcatggcgcggcagttcctggccatggccgacctgcccacc
ggttcggcgcgcaagaagacgccgtacgcgacgttcgcgtcggcgatgcagcaggtcggc
ggcctgcccgtgctggtcgacctcgccgagcggttcgcgctcgagaagcgccgccgcggg
ctgctcgagttctccgaccaggtggcgttcgcgctcgagatctgcacacgccacccggag
gtcgtcgacgcgtaccgcgaccgctacggcgcggtgctgctcgacgagtaccaggacacg
agcgtcgtgcagacccgcctgctctcgaccctgttcggcgggcgatcggtcatggccgtc
ggcgaccccgaccagtcgatctacggctggcgcggggcgagcgccacgaacctggcgcgc
ttcggcggcgacttcggcgacgcggatgccccggtctacgacctctcgacgagctggcgc
aacccgcggcgggtgctcgacgccgccaacgcgctgctgcgcccgttcctcgacgatccg
gtggtgccgaagcgcgcgctcggcgcggcgccgggcgccggtgagggtgcggtcgagctg
cgctggggcgagaccgtcgaagacgaggcggccgcggtcgccgactggttcgcagtccgg
ctgcggggcgggggacgaccgccgtcggccgcgatgctctgccgcacgctcaagcaggtc
gacgtgttcgccgaggcgttcgaggcgcggggcgttcccttccacgtgctcgggctcgcg
ggactgctcgaccagcccgtcatcgccgacctggtcagcgccctgcgcgtgctgcacgac
ccgagcgccggcgccgagctgctccgcctgctcgggggcgcgcgctggcaggtcggcgcg
gccgacctcgccgggctcgccgagaccgcgcgctggctcgccgcacgcgaccacgccctg
cagccgctcgacgacgacgtgcgggcgcgcatgcgcgcgagcgtcgtcgccgaggagcac
gcgtcgctcgtcgacgcgctcgacttcgtggtcgaggcgcccgccgggcacgccgccacg
gcgcgcatcggcgaggaggggctcgcccgcatgcgcgccgcgggggcccagctcatgtcg
ctccggcggcgcgccggcctcgagctcgccgacctggtcacgctcgtgcagcacgagctg
ctgctcgacatcgaggtgggcgcgaacgccgcgcagccgctcggcgcgccgagcctggag
gcgttcgacgagctgctcgccgggttcctcgacgtgagcgaacagcccacgctcggcgcg
ttcctcggctggctcgccgaggccgagcagcgcgaccggctcgcccccggcaggacgagc
ccgaaccgggcaccgtgcaggtgctcacggtgcacggctccaaggggctcgagtgggacc
tcgtcgccctgccacgcgccgtcgaggacgagctgccgtcggcgccgctgtcgaccaagg
gctggctcgccttcggcgagctgccgtacgagttcaagggcgatcgcgacgagctgcccg
acctcgcctggcgcggcgtgcacgaccagaagcagttcgaggaggcgacgaaggagtacc
aggccgagatccgtcgcctgcacgaggaggagcagcggcggctcgcctacgtggccgtca
cgcgcgcccggcgcgagctgctgttcagcgggtcgtggtggtcggtgcagaagggcgcgc
gggggccgagcccgtacctgcacgagctggtggcggccggcgtgctcgccgaggaggcgc
tgcccggcccgagcgtgcacgagacgaacccgcgcgcgggcggcgggcagcgcgcgacgt
ggccgctcgacccgctgggcgcgcgccgggcccgggtga
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