Agromyces mangrovi: GCM10025877_06050
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Entry
GCM10025877_06050 CDS
T09181
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
amav
Agromyces mangrovi
Pathway
amav03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
GCM10025877_06050
09124 Replication and repair
03420 Nucleotide excision repair
GCM10025877_06050
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amav03021
]
GCM10025877_06050
03400 DNA repair and recombination proteins [BR:
amav03400
]
GCM10025877_06050
Enzymes [BR:
amav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM10025877_06050
Transcription machinery [BR:
amav03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
GCM10025877_06050
DNA repair and recombination proteins [BR:
amav03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
GCM10025877_06050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
BDZ63667
LinkDB
All DBs
Position
642475..644115
Genome browser
AA seq
546 aa
AA seq
DB search
MSDGPLIVQSDRTVLLEVANPLAEDARHDLAVFAELERAPEHIHTYRITRLGLWNARAAG
HDADDMLGTLERYSKFPVPTTVAVDIRETVGRYGRLVIDRTDDGDLRLRSDDLAVLTEVS
GAKRIAPLLDARIDDTGFLVAAWARGQLKQELVKLGWPAEDLAGYTPGTPHDIDLAEDGW
HLRDYQKKAVDNFFDGGSGVVVLPCGAGKTLVGAGAMATAKTTTLILVTNTVSARQWRDE
LLRRTSLTPEEIGEYSGQVKEVKPVTIATYQILTAKRKGEYAHLALLDALDWGLVVYDEV
HLLPAPVFKLTAELQARRRLGLTATLVREDGREGDVFSLIGPKRFDAPWKEIEAQGFISP
AACYEVRIDLPQSERLAYAASADDERYRLAATAPAKLQVVRELVAKHAGERILVIGQYLD
QIEELSEALGAPQLTGATPVDERERLFQEFRDGTTQVLVVSKVANFSVDLPEATVAIQVS
GSFGSRQEEAQRLGRLLRPKESGLSANFYTLVSRDTVDQDFAQNRQRFLAEQGYSYTILD
AHALAA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacggccccctgatcgtccagagcgatcgcaccgtactgctcgaagtcgcgaac
ccgctcgccgaggacgcgcgccacgacctcgcggtcttcgccgagctcgagcgcgcgccc
gagcacatccacacgtaccgcatcacgcggctcggcctgtggaacgcgcgcgccgccggg
cacgacgccgacgacatgctcggcacgctcgagcgctactcgaagttcccggtgccgacc
accgtcgcggtcgacatccgcgagaccgtcggccgctacggccgcctcgtgatcgaccgc
accgacgacggcgacctgcggctgcgcagcgacgacctcgcggtgctcaccgaggtgagc
ggggcgaagcgcatcgcgccgctgctcgacgcgcgcatcgacgacaccgggttcctcgtc
gccgcgtgggcgcgcgggcagctcaagcaggagctcgtgaagctcggctggccggccgag
gacctcgccgggtacacgcccggaaccccgcacgacatcgacctcgccgaggacggctgg
cacctgcgcgactaccagaagaaggccgtcgacaacttcttcgacggcggctcgggcgtc
gtggtgctcccgtgcggcgcgggcaagacgctcgtgggcgcgggcgcgatggcgacggcg
aagaccaccacgctcatcctcgtgaccaacaccgtctccgcccggcagtggcgcgacgag
ctgctgcgccgcacgtcgctcacccccgaggagatcggcgagtactccgggcaggtgaag
gaggtcaagccggtcacgatcgcgacgtaccagatcctcaccgcgaagcggaagggcgag
tacgcgcacctcgcgctgctcgacgcgctcgactggggcctcgtggtctacgacgaggtg
cacctgctgccggcgcccgtgttcaagctcacggccgagctgcaggcccgccgccgcctc
ggcctcaccgccacgctcgtgcgcgaggacggccgcgagggcgacgtgttctcgctgatc
ggcccgaagcggttcgacgcgccgtggaaggagatcgaggcgcagggcttcatctccccc
gccgcctgctacgaggtgcgcatcgacctgccgcagtcggagcggctcgcctacgcggcg
tccgccgacgacgagcggtaccggctcgccgcgaccgcgcccgcgaagctccaggtcgtg
cgcgagctggtcgcgaagcacgccggcgaacgcatcctcgtcatcggccagtacctcgac
cagatcgaggagctctccgaggcgctcggcgcaccgcagctgacgggtgccacgccggtc
gacgagcgcgagcggctgttccaggagttccgcgacggcaccacgcaggtgctcgtcgtg
tcgaaggtcgcgaacttctcggtcgacctgcccgaggcgaccgtcgcgatccaggtgtcg
ggctcgttcggctcgcgccaggaggaggcgcagcgcctcggacggctgctgcggccgaag
gagtcgggactgtcggcgaacttctacacgctggtctcgcgcgacacggtcgaccaggac
ttcgcgcagaaccgccagcgcttcctcgccgagcagggttacagctacaccatcctcgac
gcgcacgcgctggccgcgtag
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