Agromyces mangrovi: GCM10025877_07330
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Entry
GCM10025877_07330 CDS
T09181
Symbol
sucD
Name
(GenBank) succinate--CoA ligase [ADP-forming] subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
amav
Agromyces mangrovi
Pathway
amav00020
Citrate cycle (TCA cycle)
amav00640
Propanoate metabolism
amav00660
C5-Branched dibasic acid metabolism
amav00720
Other carbon fixation pathways
amav01100
Metabolic pathways
amav01110
Biosynthesis of secondary metabolites
amav01120
Microbial metabolism in diverse environments
amav01200
Carbon metabolism
Module
amav_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amav_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
GCM10025877_07330 (sucD)
00640 Propanoate metabolism
GCM10025877_07330 (sucD)
00660 C5-Branched dibasic acid metabolism
GCM10025877_07330 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
GCM10025877_07330 (sucD)
Enzymes [BR:
amav01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
GCM10025877_07330 (sucD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
BDZ63795
LinkDB
All DBs
Position
complement(778527..779429)
Genome browser
AA seq
300 aa
AA seq
DB search
MSIFLNKDSKVIVQGITGGEGTKHTALMLKAGTQVVGGVNARKAGTTVLHHDAEGAPVEL
PVYGSVAEAMAETGADVSIAFVPPAFTKDAMIEAIDAGIGLLVVITEGVPVQDTAEAWAY
NKAKGEQTRIIGPNCPGIITPGESLVGITPATITGKGPIGLVSKSGTLTYQMMYELRDLG
FSTAIGIGGDPIIGTTHIDALAAFEADPETKAIVMIGEIGGDAEERAADFIAANVTKPVV
GYVAGFTAPEGKTMGHAGAIVSGSAGTAQAKKEALEAAGVKVGKTPSETATLLREVYEAL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatcttcctcaacaaggactccaaggtcatcgtccagggcatcaccggcggcgag
ggcaccaagcacaccgcgctcatgctgaaggccggcacccaggtcgtcggcggcgtgaac
gcgcgcaaggccggcaccacggtgctgcaccacgacgccgagggcgccccggtcgagctg
cccgtctacggctcggtcgccgaggccatggccgagaccggcgccgacgtctcgatcgcg
ttcgtgccgcccgcgttcaccaaggacgccatgatcgaggccatcgacgcgggcatcggc
ctgctcgtggtcatcaccgagggcgtgcccgtgcaggacaccgccgaggcgtgggcctac
aacaaggccaagggcgagcagacccgcatcatcggcccgaactgcccgggcatcatcacg
ccgggagagtcgctcgtcggcatcaccccggccacgatcaccggcaagggcccgatcggc
ctcgtctccaagtcgggcacgctcacgtaccagatgatgtacgagctgcgcgacctcggg
ttctcgaccgccatcggcatcggcggcgacccgatcatcggcaccacgcacatcgacgcg
ctcgccgcgttcgaggccgaccccgagacgaaggcgatcgtcatgatcggcgagatcggc
ggtgacgccgaggagcgcgcggccgacttcatcgcggccaacgtgacgaagccggtcgtc
ggctacgtcgccggcttcaccgcgcccgagggcaagaccatgggccacgcgggcgccatc
gtctccggctcggccggcaccgcccaggccaagaaggaggccctcgaggccgccggcgtc
aaggtcggcaagaccccctccgagaccgccacgctgctgcgcgaggtctacgaggcgctg
tag
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