Agromyces mangrovi: GCM10025877_07920
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Entry
GCM10025877_07920 CDS
T09181
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
amav
Agromyces mangrovi
Pathway
amav03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GCM10025877_07920 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amav03021
]
GCM10025877_07920 (rpoA)
03400 DNA repair and recombination proteins [BR:
amav03400
]
GCM10025877_07920 (rpoA)
Enzymes [BR:
amav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GCM10025877_07920 (rpoA)
Transcription machinery [BR:
amav03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GCM10025877_07920 (rpoA)
DNA repair and recombination proteins [BR:
amav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GCM10025877_07920 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
AMIN-like
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
BDZ63854
LinkDB
All DBs
Position
complement(836902..837888)
Genome browser
AA seq
328 aa
AA seq
DB search
MLIAQRPTLTEENISEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRIDGVL
HEFSTVPGVKEDVTEIILNIKNLVVSSEHDEPITAYLRKQGSGEVTAADISAPAGVEVHN
PELVIATLNDTAKFELELTIERGRGYVSASQNRSEFSEAGQIPVDSIYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKAAISPRDAIASAGRTLTELFGLARELNNAAEGIEIGPAPVD
AVLSSELSIPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVKDK
LTEMGLSLKDSVPGFDGAHFYTGFDEEN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
gtgctgatcgcacagcgtcccacgctcacggaagagaacatctcggagttccgttcgcgt
ttcgtgatcgagcccctcgagccgggcttcggttacaccctcggcaactcgcttcgccgc
accctcctgtcgtcgatccccggtgccgccgtcacgagcatccgcatcgacggcgtgctg
cacgagttctccaccgtgccgggcgtgaaggaggatgtcaccgagatcatcctcaacatc
aagaacctggtcgtctccagcgagcacgacgagcccatcaccgcgtacctgcgcaagcag
ggttcgggtgaggtcaccgcggccgacatctcggctccggcgggcgtcgaggtgcacaac
cccgagctcgtcatcgcgaccctgaacgacaccgcgaagttcgaactcgagctcaccatc
gagcgcggccgcggctacgtctcggccagccagaaccgcagcgagttctccgaggccggc
cagatcccggtcgactcgatctactcgcccgtgctgaaggtcacctaccgcgtcgaggcg
acgcgtgccggtgagcgcaccgacttcgaccgactcgtggtcgacgtcgagaccaaggcg
gccatcagcccgcgcgacgccatcgcgtcggccggtcgcacgctcaccgagctgttcggc
ctcgcccgcgagctgaacaacgccgccgagggcatcgagatcggccccgcgccggtcgac
gccgtgctctcgagcgagctctcgatcccgatcgaggacctcgacctgtcggtgcgttcg
tacaactgcctgaagcgcgagggcatcaacacggtctcggagctcgtcgcactgagcgag
acccagctgatgaacatccgcaacttcggccagaagtcggtcgacgaggtcaaggacaag
ctcaccgagatgggcctgtcgctgaaggactcggtccccggcttcgacggcgcgcacttc
tacaccgggttcgacgaagagaactag
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