Agromyces mangrovi: GCM10025877_12580
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Entry
GCM10025877_12580 CDS
T09181
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amav
Agromyces mangrovi
Pathway
amav03420
Nucleotide excision repair
amav03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GCM10025877_12580
03430 Mismatch repair
GCM10025877_12580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amav03400
]
GCM10025877_12580
Enzymes [BR:
amav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GCM10025877_12580
DNA repair and recombination proteins [BR:
amav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GCM10025877_12580
MMR (mismatch excision repair)
Other MMR factors
GCM10025877_12580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AAA_12
PhoH
Motif
Other DBs
NCBI-ProteinID:
BDZ64320
LinkDB
All DBs
Position
complement(1316261..1319074)
Genome browser
AA seq
937 aa
AA seq
DB search
MSDLGGSLAVMPEYTPSQQAAIDELASPLQLIACAGSGKTQVISQRISRILDLPGARPGN
VIAFTFTEKAAAELKERIHRIVHDEHGEMTGLAEMYVGTMHGFALNLLQTYVPEAFKYGV
LTDITQRLLIDRESTKSGLTTCPSTAPSRPTLWRYADSKLYMQVLSILQEDEVDFELVPD
GVADSLRSYADLLSRRKYFDYTAMIATAVAFLESDPDDPDLTTPELELLRHIREDIKYVV
VDEYQDVNPLQEKLIAGLIRWGANLCVVGDDDQTIYQWRGSEVSNILTFANRHDDVHTIE
LADNFRSSKGVVRLGRTIAEWLPPDERLPKAMEYASHQVWERGDMLALEFAGPDEEAAWI
VDRIEALRGMPFTDTPDAAPRGLSWSDCAVLYRTVKDAEPVVDEFRRRGIPYIIKGLARL
FDAPEIEALVGMFQFMVGEIDEAALRSLFDQADILGSPELLARGIRILEEGSDFSRGDRW
GTYNVQRLYLDVLEAMDVREATIPGTPARAELVMYQLGKFSQVISDFEAINFASDPKRKY
EGFVRFITDDRQAPAYYEEADDDAGFATPDAVTITTVHRAKGMQWPAVFVPCLRKNRFPI
RASGGVNVFHVVPIEAVPNGARYRGGLSEETRLFYVAVTRAQKYLYMSWAPIASNQQARR
QSDFFRDASGSDWVLTADPGLPIVERLTSVPKTETPAIAISFSELKYLLECPYQFKLRFM
YGFNPPIHEALGYGKGLHDALAEMHKRAHAGDVPTKAEAEDLVNRHLHTPYAYPALRDQL
RRAALKALNNYFDDHGEDLTRTVHSEKQIEVVVAPGVTVDGRVDLIKRLETGEVSIVDFK
STEDAQKTATTRDQLSVYALGYQELTGESADRIQVLNLDEKGDHLNEGVDAELLDTIRAK
IEAVAADIRADQFECGHDHSKDTAYNDLAWLTTGAPA
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgacctcggcggtagcctcgcggtgatgcccgaatacactccatctcaacaggct
gcaatcgacgaactcgcttcgcctctccagctgatcgcttgcgcgggttccggcaagacg
caggtgatttcgcaaagaatttcgcggatcctagacctcccgggtgcgcggcccgggaac
gtgatcgcgttcaccttcactgagaaagccgcggcggagctgaaggagcgtatccaccgc
atcgttcacgacgaacatggcgagatgacgggcttggccgagatgtacgtgggtacgatg
cacgggttcgctctcaacctgctgcagacctacgtgcccgaagcgttcaagtacggagtc
ctcacggacataacgcagcgtctgctgattgaccgtgaatcgacgaagtcagggctcacg
acatgtccctctaccgccccgagccggccgacgctgtggcgctacgcagactcgaagctg
tacatgcaggtgctctcgatccttcaggaggacgaggtcgacttcgagctcgtgcctgac
ggggtcgccgacagcttgcgttcgtatgcggaccttctgtcgcgtcggaagtacttcgac
tacacggcaatgattgctaccgctgtcgccttccttgagtccgatcctgatgatcccgac
ctcaccaccccagagttggagctgttgcggcatattcgcgaggacatcaagtatgtcgtc
gtcgacgagtaccaggacgtgaacccccttcaggagaagctgatcgccggcctcatccgg
tggggcgctaacctctgtgtcgtcggcgatgacgatcagacgatctaccagtggcgtggc
tccgaggtctcgaacatcctcacctttgccaaccggcacgacgatgtccacacgattgag
ctcgccgacaatttccgttcgtccaagggcgtcgtgcgcttgggccgcaccattgctgag
tggctcccaccagatgagcgacttccgaaggcgatggagtacgcatcgcatcaggtctgg
gagcgaggtgacatgctcgcactagagtttgcgggtccagatgaagaagccgcatggatc
gtcgatcgcatcgaagcactgcgggggatgcctttcaccgacacacctgatgctgcaccg
cgaggactgtcatggtcggactgcgcggtgctctatcgcactgtcaaagacgccgaacct
gtggtcgatgagttccggcgccgcggcatcccgtacatcatcaagggactcgcgcggttg
ttcgatgcgccggagatcgaggcactcgttggcatgttccagttcatggtcggtgagatc
gatgaagccgccctgaggagcctgttcgatcaggccgacattcttggctcacccgaactg
ttggcacgcggcatacggattctcgaggaaggctctgacttcagtcgcggcgaccggtgg
ggcacctacaacgtccagcgtctctacctcgacgtgctcgaggcgatggacgtccgtgag
gcgacgatccctggcacgcctgcgcgggcagagttggtgatgtaccagctcgggaagttc
tcccaagtgatctcagacttcgaggcgatcaacttcgcgtccgacccgaagcgcaagtac
gagggattcgtccgattcatcacagatgatcgacaggcaccggcgtactacgaggaagca
gacgacgatgcaggattcgccacgcctgacgcggtcacgatcacgacagtccatcgggcg
aaggggatgcaatggccggccgtattcgtgccgtgcttgaggaagaaccgcttccccatt
cgcgcgagcggcggcgtgaacgtgttccacgtagtaccaatcgaagcagtcccgaacggc
gctcgatatcggggcggtctctcggaggagactcgactgttctacgtcgcagtcactcgc
gcgcagaagtacctttacatgtcctgggcacccatcgcgtccaaccagcaagcacgacgc
cagtccgacttcttccgtgatgcgtccggctccgactgggtgctcacggccgacccagga
ttgcctatcgtggaacgtctcacgtcggtgccgaagacggagacaccggcgatcgccatc
tcgttctccgagctgaagtacctgctggagtgcccttaccagttcaagttgcggttcatg
tacgggttcaacccgcccatccatgaggcgctcggctacggcaagggtctccacgacgcg
ctcgccgagatgcacaagcgcgcgcatgccggagacgtgcccaccaaggctgaagctgag
gatctcgtcaaccgccacctccacacgccgtacgcatacccggcgctacgcgatcagttg
cgtcgggcggccttgaaggcgctgaacaactacttcgacgaccacggggaggatctcacc
cggaccgtgcactcagagaagcagatcgaggtggtcgtcgcgccgggcgtcacggttgac
gggcgcgtggatctcatcaagaggctcgagacgggggaagtatcgatcgtcgacttcaag
tcgacggaagacgcgcagaagaccgctacgacccgcgatcaactcagtgtctacgcgctc
gggtaccaagaactgactggcgagtcagcggaccggatccaggtgctcaacctggatgag
aaaggcgaccacctcaatgagggcgtggacgctgagctccttgacacgatccgtgcgaag
atcgaagcggtggctgcggacatccgtgccgaccagtttgagtgcggtcacgatcactcg
aaggacaccgcctacaacgatcttgcgtggctcaccacgggggcacccgcgtag
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