Agromyces mangrovi: GCM10025877_20210
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Entry
GCM10025877_20210 CDS
T09181
Name
(GenBank) transcriptional regulator
KO
K17640
LacI family transcriptional regulator, xylobiose transport system transcriptional regulator
Organism
amav
Agromyces mangrovi
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amav03000
]
GCM10025877_20210
Transcription factors [BR:
amav03000
]
Prokaryotic type
Helix-turn-helix
LacI family
GCM10025877_20210
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_4
LacI
Peripla_BP_1
HTH_IclR
HTH_31
HTH_3
TetR_N
Peripla_BP_6
FAO_M
Motif
Other DBs
NCBI-ProteinID:
BDZ65083
LinkDB
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Position
complement(2117142..2118152)
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AA seq
336 aa
AA seq
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MSEPATTVTLKDVAEAAGVSVGTASRALSGRGDLTRGTRERVAEIARTLGYERSSGPRGR
PTTLDPRLIEFVLGSFDDAWTDAMTTGAREAAFRLGFDLVLTLDRPDPSDDWPTRVATRR
PTGVVIGIIRPTASQLAQIRGLRIPIVLLDPMSDPEGELASVGTTDWQGGYDAGAHLAGC
DVERFAVVTGVPRYRFGRAREEGFRQAIAELRPDAEIAHVDSRWTDSPLTADLMKLVTDK
SRVGVFACNDEMALAVYRAAARAGKRIPEDLSVVGFNDEPRAASSRPPLTSVHQPLRDMA
ARAIELVPELRRHDDAVHDRIELPCTLVVRGSTRPR
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaacctgcgacgacggtcacgctcaaggacgtcgccgaggccgccggcgtgtcg
gtcggcacggcgtcgcgcgcgctctcggggaggggcgacctgacccgaggtacccgggag
cgcgtcgcggagatcgctcggacgctcggctacgagcgctcgagcggcccccgcggccgc
ccgacgaccctcgatccccgcctcatagaattcgtgctcgggagcttcgacgacgcgtgg
accgacgcgatgaccaccggagcccgcgaagctgcgttccggctcggattcgacctggtg
ctcaccctcgaccgcccggacccctcggacgactggccgacccgcgtcgccacccgccgc
ccgacgggcgtcgtcatcggcatcatccgccccacggcgagtcagctcgcccagatccgc
ggactgcgcatcccgatcgtgctgctcgacccgatgtcggaccccgaaggcgagctcgcc
agcgtgggaaccaccgactggcagggcggctacgacgccggcgcacacctggccggctgc
gacgtcgaacggttcgccgtggtcacgggcgtgccgcgctaccgattcggtcgcgcgcgc
gaggagggcttccgtcaggcgatcgccgagctccgcccggacgcggagatcgcacatgtc
gactcgcgctggaccgattccccgctcaccgccgacctgatgaaactcgtgaccgacaag
tcgcgcgtcggggtgttcgcgtgcaacgacgagatggcactggcggtctatcgcgccgcc
gcgcgagcgggcaagcggatccccgaggacctcagcgtcgtcggcttcaacgacgagccg
cgcgccgcgagctcgcggcccccgctgacgagcgtccaccaaccgctgcgcgacatggcg
gcgcgcgcgatcgagctcgtccccgaactgcgccgccacgacgacgccgtgcacgaccgc
atcgagcttccgtgcacgctcgtcgtgcggggctcgacgagaccacgctga
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