Agromyces mangrovi: GCM10025877_29040
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Entry
GCM10025877_29040 CDS
T09181
Symbol
fadB
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
amav
Agromyces mangrovi
Pathway
amav00071
Fatty acid degradation
amav00280
Valine, leucine and isoleucine degradation
amav00310
Lysine degradation
amav00362
Benzoate degradation
amav00380
Tryptophan metabolism
amav00410
beta-Alanine metabolism
amav00640
Propanoate metabolism
amav00650
Butanoate metabolism
amav00907
Pinene, camphor and geraniol degradation
amav00930
Caprolactam degradation
amav01100
Metabolic pathways
amav01110
Biosynthesis of secondary metabolites
amav01120
Microbial metabolism in diverse environments
amav01200
Carbon metabolism
amav01212
Fatty acid metabolism
Module
amav_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
GCM10025877_29040 (fadB)
00650 Butanoate metabolism
GCM10025877_29040 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
GCM10025877_29040 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
GCM10025877_29040 (fadB)
00310 Lysine degradation
GCM10025877_29040 (fadB)
00380 Tryptophan metabolism
GCM10025877_29040 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
GCM10025877_29040 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
GCM10025877_29040 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GCM10025877_29040 (fadB)
00930 Caprolactam degradation
GCM10025877_29040 (fadB)
Enzymes [BR:
amav01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
GCM10025877_29040 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
GCM10025877_29040 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
GCM10025877_29040 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
ECH_2
3HCDH
NAD_binding_2
DAO
F420_oxidored
AlaDh_PNT_C
2-Hacid_dh_C
UDPG_MGDP_dh_N
NAD_Gly3P_dh_N
NAD_binding_8
GIDA
Motif
Other DBs
NCBI-ProteinID:
BDZ65966
LinkDB
All DBs
Position
complement(3029386..3031569)
Genome browser
AA seq
727 aa
AA seq
DB search
MTIEAIVTEAPAIHWDRDEDGVVTLTLDDPDATVNTMNDAYTSSMTIVVDRLEAELDDVT
GVILASAKSSFFAGGDLNQLKQGSPETAAEQTAHIERVKADLRRLERLGKPVVAAINGTA
LGGGLEVALAAHHRIAADAKGSRIGLPEVTLGLLPGGGGITRTVRMLGLQDALTKVIMTG
TKYTPAGALEVGLVDEVVPTVDALVPAAKAWIAAHPTAVKPWDEKGFRIPGGGPNSPSVA
SLLPAMAANVRKQVKGAPMPAPRAALAAAVEGALVDFDTASTIETRYLVSLTIGQVAKNM
INAFFFDLQKINAGASRPDGYPKFQATKVGVIGAGMMGAAIAYVSAKAGIDVVLKDVSIE
AARRGKGYAERIEATALQRGKTTPEKSAALLARITPSADPADFAGVDLVIEAVFESADVK
QAVFQEIEDVVEPDAVLGSNTSTLPITELSAGVKRPDDFIGIHFFSPVDKMPLVEIVRGR
NTGDEVLAKTFDYVLQIRKTPIVVNDNRGFFTSRVIGRYIDEAVAAVGEGVSPATVEQAS
LQAGYPAGALQLLDELTITLTQKIREETKKAAIAEGRGWTEHGAEAVVDRMVDELGRKGR
STGGGFYDYDADGRRVGLWPGLADAFGTGTEVPFEDLKERMLFAEAIDTVRCFDEGVLTS
VADANIGSIYGIGFPAWTGGVIQYINQYDGGLPGFVARARELAEAYGPHFEPPASLVAKA
EAGEVYA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcgaagccatcgtgaccgaggcgcccgcgatccactgggatcgcgacgaggac
ggcgtcgtcaccctgaccctcgacgaccccgacgccaccgtcaacaccatgaacgacgcg
tacacctcgtcgatgaccatcgtcgtcgatcggctcgaggccgagctcgacgacgtcacg
ggcgtcatcctcgccagcgcgaagtcgagcttcttcgccggcggcgacctcaaccagctc
aagcagggctcgcccgagaccgccgccgagcagacggcgcacatcgaacgcgtcaaggcc
gacctgcgccgactcgagcggctcggcaagccggtcgtcgcggcgatcaacggcaccgcc
ctcggcggcgggctcgaggtcgccctcgccgcgcaccaccgcatcgcggccgacgcgaag
ggcagccgcatcggcctgccggaggtgacgctcgggctgctgcccggcggcggcggcatc
acccgcaccgtgcgcatgctcgggctgcaggacgcgctgaccaaggtgatcatgaccggc
acgaagtacacccccgccggcgcgctcgaggtcggcctggtcgacgaggtcgtgccgacg
gtcgacgccctcgtgccggccgcgaaggcctggatcgccgcccacccgaccgcagtgaag
ccgtgggacgagaagggcttccgcatccccggcggcggtccgaacagcccgtcggtcgcg
tcgctcctgccggcgatggccgcgaacgtgcgcaagcaggtcaagggcgcgccgatgccc
gccccgcgcgccgcgctcgccgccgccgtcgagggagcgctcgtcgacttcgacaccgcg
agcaccatcgagacccgctacctggtctcgctcaccatcggccaggtcgcgaagaacatg
atcaacgcgttcttcttcgacctccagaagatcaacgccggggcgagccgccccgacggg
tacccgaagttccaggcgaccaaggtcggcgtgatcggcgccggcatgatgggcgccgcc
atcgcctacgtgtcggcgaaggccggcatcgacgtggtgctgaaggacgtgtcgatcgaa
gcggcgcgtcgcggcaagggctacgcggagcgcatcgaggccacggccctgcagcgcgga
aagaccacgcccgagaagtcggcggcactgctcgcccgcatcacgccgtcggccgacccg
gcggacttcgccggcgtcgacctcgtcatcgaggcggtgttcgagagcgccgacgtgaag
caggcggtcttccaggagatcgaggatgtcgtggaacccgacgcggtgctcgggtcgaac
acctcgaccctgccgatcaccgagttgtccgccggcgtcaagcgacccgacgacttcatc
ggcatccatttcttctcccccgtcgacaagatgccgctcgtcgagatcgtgcgcggccgc
aacaccggcgacgaggtgctcgcgaagacgttcgactacgtgctgcagatccgcaagacc
ccgatcgtcgtgaacgacaaccgcgggttcttcacctcgcgcgtgatcggccggtacatc
gacgaggccgtcgcggccgtcggcgagggcgtctcccccgccacggtggagcaggcatcg
ctgcaggccggctacccggccggcgcgctgcagctgctcgacgagttgacgatcaccctc
acccagaagatccgcgaggagacgaagaaggcggccatcgccgagggcaggggctggacc
gagcacggcgccgaggcggtcgtcgaccgcatggtcgacgagctcggccgcaagggtcgc
tcgaccggcggcgggttctacgactacgacgccgacggcaggcgcgtcggcctgtggccg
ggcctcgccgatgcgttcggaacaggcaccgaggtgccgttcgaggacctcaaggaacgg
atgctgttcgccgaggcgatcgacaccgtgcgctgcttcgacgagggcgtgctcacgagc
gtcgccgacgcgaacatcgggtcgatctacggcatcgggttcccggcctggacgggcggc
gtcatccagtacatcaaccagtacgacggcggcctgcccggcttcgtggctcgcgcccgc
gagctcgccgaggcctacggaccgcacttcgagcccccggcgtcgctcgtcgcgaaggcc
gaggccggcgaggtctacgcctga
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integrated database retrieval system