Agromyces mangrovi: GCM10025877_29250
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Entry
GCM10025877_29250 CDS
T09181
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amav
Agromyces mangrovi
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amav03016
]
GCM10025877_29250 (truB)
Enzymes [BR:
amav01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GCM10025877_29250 (truB)
Transfer RNA biogenesis [BR:
amav03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GCM10025877_29250 (truB)
Prokaryotic type
GCM10025877_29250 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
BDZ65987
LinkDB
All DBs
Position
3053083..3053985
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AA seq
300 aa
AA seq
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MTPVTSGILLVDKPQQITSHGVVGRVRRLAGTRKVGHAGTLDPMATGLLVIGIGASTRLL
HHMVGLDKRYEATIRLGATTVTDDAEGEVVEVADAAAVDAVTRDAVDAGIRALTGAIEQV
PSAVSAIKVDGRRAYDRVRAGEDVELAARAVTVHGFAVDAERRGDRWIDLDVTVDCSSGT
YIRALARDLGAALGVGGHLTMLRRTRVGPFDVVDAVELADDTDVASALLAPAEAASRVLP
RVDVDAGQATDLGHGKRVALDPGSRGPFAAVDPDGRLVAIVDRRGDTLAVVTGFPAEEAS
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
ttgacccccgtgaccagcggcatcctcctcgtcgacaagccgcagcagatcaccagccac
ggggtggtcgggcgggtgcggcgcctcgccggcacccggaaggtcggccacgccggcacc
ctcgacccgatggccaccggcctgctcgtgatcggcatcggcgcgtccacgcgcctgctg
caccacatggtcggcctcgacaagcgctacgaggcgacgatccggctcggcgccacgacc
gtgaccgacgacgccgagggcgaggtcgtcgaggtcgcggacgccgcagcggtggacgcg
gtcacccgggacgcggtcgacgccggtatccgcgccctcaccggcgccatcgagcaggtg
ccgagcgccgtcagcgccatcaaggtcgacggccgccgcgcctacgaccgggtgcgtgcg
ggggaggacgtggagctcgccgcgcgtgccgtcaccgtgcacggcttcgcggtcgacgcc
gagcggcgcggcgaccgctggatcgacctcgacgtgacggtcgactgctcgtcgggcacg
tacattcgtgccctcgcgcgcgacctcggggcggcgctgggggtcggcggtcacctcacg
atgctccgccgcacgcgcgtcggcccgttcgacgtggtcgacgcggtcgagctcgccgac
gacaccgacgtggcatccgccctgctggcgcccgccgaggcggcgtcgcgcgtgctgccc
cgcgtcgacgtcgacgcaggccaggcgaccgacctcggtcacggcaagcgcgtcgcgctg
gaccccggctcccgcggcccgttcgcggccgtcgaccccgacgggcgcctcgtcgcgatc
gtcgaccgccgcggcgacaccctcgccgtggtcaccggattccccgccgaggaggcatcg
tga
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