Agromyces mangrovi: GCM10025877_30510
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Entry
GCM10025877_30510 CDS
T09181
Symbol
pel
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
amav
Agromyces mangrovi
Pathway
amav00040
Pentose and glucuronate interconversions
amav01100
Metabolic pathways
amav02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
GCM10025877_30510 (pel)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GCM10025877_30510 (pel)
Enzymes [BR:
amav01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
GCM10025877_30510 (pel)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
POT1
Motif
Other DBs
NCBI-ProteinID:
BDZ66113
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All DBs
Position
complement(3173242..3174549)
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AA seq
435 aa
AA seq
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MQRRWISTTVAATGGLALLLAGTGPAWAGDGRVHQDELGRAVLADGDGWGSAGAGTSGGS
AADADHVVTVTDRAGLVAAVAGDEPKIVYVDGVIDANTADDGTPLACTDYARDGYTLEAY
LAAYDPAVWGWDEEPYGPLEDARDASSDAQKERIDIKIGSNTTLIGLPGSEITGAALQIA
NVQNVIVRGLTLTNAYDCFPAWDPTDGDAGEWNSEWDLLTVTGSTNVWIDHNDLSDGDAL
DSEQPVYLGRPLQVHDGLLDIVRGSDLVTVSWNLFHDHDKVMLIGNTDSTRYDEWDKLRV
TLHHNEFRDLGQRTPRVRYGDVDVYNNSYVEEPGDDYDYFYSWGLGIESHLVAEHNAFTG
IDASEAIGVYKGTAITESGNVLDKVVTDFLGAYNADTGALIADDAGWTPVLRTKVHPAQA
VPAIVAAFAGPGGLR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgacgctggatcagtacgaccgtggccgcgacgggcggcctcgcgctcctgctc
gccggaaccgggcccgcctgggcgggcgatggccgcgtgcaccaggacgagctcggccgc
gcggtgctcgccgacggcgacggctggggctccgcgggtgcgggcacctcgggcggctcc
gccgccgacgccgaccacgtcgtcacggtcaccgatcgcgccggcctcgtcgcagcagtc
gcgggcgacgaaccgaagatcgtctacgtcgacggcgtgatcgacgccaacaccgcggac
gacggcactcccctcgcctgcaccgactacgcgcgcgacggctacacgctcgaggcgtac
ctcgccgcgtacgaccctgcggtctggggctgggacgaggagccgtacggcccgctcgag
gacgcgcgcgacgcgtcgagcgacgcccagaaggagcgcatcgacatcaagatcgggtcg
aacaccacgctgatcggcctgcccggctcggagatcacgggcgcagcgctgcagatcgcg
aacgtgcagaacgtgatcgtgcgcgggctcacgctcacgaacgcgtacgactgcttcccc
gcatgggacccgaccgacggcgacgccggcgagtggaactccgagtgggacctgctcacc
gtgaccggttcgaccaacgtctggatcgaccacaacgacctgagcgacggcgacgcgctc
gactcggagcagccggtgtacctcggccgcccgctgcaggtgcacgacggcctgctcgac
atcgtgcgcggctccgacctcgtcaccgtgtcgtggaacctcttccacgaccacgacaag
gtgatgctcatcggcaacaccgactccacgcgctacgacgagtgggacaagctgcgtgtc
accctgcaccacaacgagttccgcgacctcgggcagcgcacgccgcgcgtgcgctacggc
gacgtcgacgtctacaacaacagctacgtcgaggaaccgggcgacgactacgactacttc
tacagctggggcctcggcatcgagtcgcacctggtcgccgagcacaacgcgttcacgggc
atcgatgcgtccgaggcgatcggcgtgtacaagggcacggcgatcaccgagtcgggcaac
gtgctcgacaaggtggtgaccgacttcctcggcgcctacaacgccgacaccggtgcactg
atcgcggatgacgcgggctggacgcccgtgctgcgcacgaaggtgcacccggcgcaggcg
gtgccggcgatcgtggcggcgttcgccggcccgggcggcctgcgctga
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