Agromyces mangrovi: GCM10025877_31620
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Entry
GCM10025877_31620 CDS
T09181
Name
(GenBank) DNA-directed DNA polymerase
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amav
Agromyces mangrovi
Pathway
amav03030
DNA replication
amav03430
Mismatch repair
amav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM10025877_31620
03430 Mismatch repair
GCM10025877_31620
03440 Homologous recombination
GCM10025877_31620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amav03032
]
GCM10025877_31620
03400 DNA repair and recombination proteins [BR:
amav03400
]
GCM10025877_31620
Enzymes [BR:
amav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM10025877_31620
DNA replication proteins [BR:
amav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCM10025877_31620
DNA repair and recombination proteins [BR:
amav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCM10025877_31620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BDZ66224
LinkDB
All DBs
Position
3277481..3280948
Genome browser
AA seq
1155 aa
AA seq
DB search
MLDGAARVGELVAAAKEQGQPAIAMTDHGNVFGAYDFWKQATDVGIKPIIGTEAYLTPGT
ARGDKTRVRWGNGGGDDVSGAGAYTHMTLLAENTAGMHNLFRLNSLASIEGYYFKPRMDR
ELLETYGTGLIATTGCPSGEVQTRLRLGQYDEAVRAAADYRDIFGKENFFCEVMDHGLGI
ERRIQGDLIRLARELDLPLVATNDLHYTHAHDAKSHAALLCVQSGSTLDDPNRFKFDADD
FYLRTAAEMRRTWDQYPEACDNTLLIAERCEVEFNTSANYMPRFPVPDGENEESWFVKEV
ENGLHERYPGGIPDAVRKQADYEVGVIVQMGFPGYFLVVADFINWSKDHGIRVGPGRGSG
AGSMAAYAMKITDLDPLQHGLIFERFLNPDRVSMPDFDVDFDERRRGEVIKYVTDKYGDE
RVAQIVTYGTIKAKQALKDSSRVLGFPFGMGEKLTKAMPPAVMGKDIPLSGIFDRDHPRY
KEAGDIRALIETDPEAKTVFDTAVGLENLKRQWGVHAAGVIMSSEPLIDIIPIMKREQDG
QIVTQFDYPACESLGLIKMDFLGLRNLTIIDDALDNIEANRGFRPVLEDLALDDREAYEL
LGRGDTLGVFQLDGGPMRSLLRLMKPDNFEDISAVIALYRPGPMGANSHTNYALRKNGQQ
EITPIHPELAEPLKDILDTSYGLIIYQEQVMAIAQKVAGFSLGQADILRRAMGKKKKSEL
DKQYAGFQQGMHDNGYSDAAVKTLWDILLPFSDYAFNKAHSAAYGVLSYWTAYLKAHYPA
EYMAALLTSVGDARDKLAMYLNECRRMGIKVLPPDVNESIGFFAAVGEDIRFGLGAVRNV
GFNVVEAIRGAREAEGRFESFHDFLKKVPIPVANKRTVESLAKAGAFDSLGHTRRALVEI
HESAVESAVKDKRAEANGDVGFDFDSLFEEDERAPVAQVPDRPEWTKRDKLAFEREMLGL
YVSDHPLAGLEVPLAKHASTTITDLVSSDATQDGDTATIAGLVTSVQHRVARSSGNQYGM
IQVEDFSGELTVMFMGKAYQEFSPDLQADRIAVVRGRVSMRDDGMNLHAYSIVLPELGQE
DESGPVVISLPDQRATTDTVVALGEVLGRHSGSTEVHLKLVKGGTARVFELPFPVRVTPD
LYGELKSLLGPNCLV
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacggggcggcccgggtgggcgagctggtggccgcggcgaaggagcagggccag
cccgccatcgcgatgaccgaccacggcaacgtgttcggcgcctacgacttctggaagcag
gcgacggatgtcggcatcaagccgatcatcggcaccgaggcgtacctgacgccgggcacc
gcacgcggcgacaagacccgcgtgcgctggggcaacggcggcggcgacgacgtgtcgggt
gccggcgcgtacacgcacatgacactgctcgccgagaacaccgcgggcatgcacaacctc
ttccggctcaactcgctcgcgtcgatcgaggggtactacttcaagccgcgcatggaccgc
gagctgctggagacctacgggacgggcctcatcgcgacgaccggctgcccgtcgggcgag
gtgcagacccggctccggctcggccagtacgacgaggccgtgcgggccgcggccgactac
cgcgacatcttcgggaaggagaacttcttctgcgaggtgatggaccacggcctcggcatc
gagcgccgtatccagggcgacctgatccggctcgcacgggaactcgacctgccgctcgtc
gcgaccaacgacctgcactacacgcacgcgcacgacgcgaagagccacgcggcactgctc
tgcgtgcagtcggggtcgacgctcgacgacccgaaccgcttcaagttcgacgccgacgac
ttctacctgcgcacggccgccgagatgcgccgtacgtgggaccaataccccgaggcgtgc
gacaacacgctgctcatcgccgagcggtgcgaggtcgagttcaacacgagcgcgaactac
atgccgcgtttccccgtgcccgacggcgagaacgaggagagctggttcgtcaaggaggtc
gagaacggactgcacgagcgctaccccggcggcatccccgacgcggtgcggaagcaggcc
gactacgaggtcggcgtcatcgtgcagatgggcttccccgggtacttcctcgtcgtcgcc
gacttcatcaactggtcgaaggaccacggcatccgcgtcggccccggccgaggctcgggc
gccggctcgatggcggcgtacgcgatgaagatcaccgacctcgacccgctccagcacggc
ctcatcttcgagcgcttcctgaaccccgaccgcgtctcgatgcccgacttcgacgtggac
ttcgacgagcggcgccgcggcgaggtcatcaagtacgtgaccgacaagtacggcgacgag
cgcgtcgcgcagatcgtcacctacggcacgatcaaggcgaagcaggccctcaaggactcg
tcgcgcgtgctcggcttcccgttcggcatgggggagaagctcaccaaggcgatgccgccc
gcggtcatgggcaaggacatcccgctgtcgggcatcttcgaccgcgaccacccgcggtac
aaggaagcgggtgacatccgcgccctgatcgagaccgacccggaggcgaagaccgtcttc
gacacggccgtcgggctcgagaacctgaagcgccagtggggcgtgcacgcggcgggcgtg
atcatgtcgagcgagccgctgatcgacatcatcccgatcatgaagcgcgagcaggacggc
cagatcgtcacgcagttcgactacccggcgtgcgagtcgctcggcctcatcaagatggac
ttcctggggttgcgcaacctcaccatcatcgacgacgcgctcgacaacatcgaggccaac
cgcggcttccgcccggtgctggaagacctggcgctcgacgaccgcgaggcctacgaactg
ctgggccgtggcgacaccctcggcgtgttccagctcgacggcgggccgatgcggtcgctc
cttcgcctcatgaagcccgacaacttcgaggacatctcggcggtcatcgcgctctaccgc
cccggaccgatgggcgcgaactcgcacacgaattacgcgctccgcaagaacggccagcag
gagatcacgccgatccatcccgagctggccgagccgctgaaggacatcctcgacacgagc
tacggcctcatcatctaccaggagcaggtgatggcgatcgcgcagaaggtcgccgggttc
agcctcggccaggccgacatcctgcggcgggcgatgggcaagaagaagaagtccgagctc
gacaagcagtacgccggcttccagcagggcatgcacgacaacggctactcggatgccgcg
gtcaagacgctctgggacatcctgctgccgttctccgactacgccttcaacaaggcgcac
tcggccgcctacggcgtgctcagctactggaccgcgtacctgaaggcgcactacccggcc
gagtacatggccgcgctgctcacgagcgtcggcgatgcgcgcgacaagctcgccatgtac
ctcaacgagtgccgtcgcatgggcatcaaggtgctgccgcccgacgtcaacgagtcgatc
gggttcttcgccgccgtcggcgaggacatccgcttcggcctcggcgccgtgcgcaacgtg
ggcttcaacgtcgtcgaggcgatccgcggcgcccgcgaggcggaggggcggttcgagtcg
ttccacgacttcctgaagaaggtgccgatcccggtcgcgaacaagcgcacggtcgagtcg
ctggcgaaagccggcgcgttcgactcgctcgggcacacccgtcgcgcgctcgtggagatc
cacgagtcggcggtcgagtcggcggtgaaggacaagcgggccgaggccaacggcgacgtc
gggttcgacttcgacagcctgttcgaggaggacgagcgcgcgcccgtcgcgcaggtgccc
gaccggcccgagtggaccaagcgcgacaagctcgcgttcgagcgcgagatgctcgggctg
tacgtctccgaccatccgctcgcggggctcgaggtgccgctcgcgaagcacgcgtcgacc
accatcaccgacctggtgtcgtcggatgccacgcaggacggcgacaccgccaccatcgcc
ggtctcgtgacgagcgtgcagcaccgcgtcgcgcgctcgagcggcaaccagtacggcatg
atccaggtcgaggacttctcgggcgagctgaccgtcatgttcatggggaaggcgtaccag
gagttctcgcccgacctgcaggccgaccgcatcgcggtcgtgcgcggccgcgtgagcatg
cgcgacgacggcatgaacctgcacgcgtacagcatcgtgctgcccgagctcgggcaggag
gacgagtcggggcccgtggtcatctcgctgcccgaccagcgcgcgacgaccgacacggtc
gtggcgctcggcgaggtgctcggacgccactccggcagtaccgaggtgcacctgaagctc
gtgaagggcggcaccgcccgcgtgttcgagctgccgttcccggtgcgcgtcacgcccgac
ctctacggcgagctgaagagcctgctcggcccgaactgcctggtctga
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