KEGG   Agromyces mangrovi: GCM10025877_32530
Entry
GCM10025877_32530 CDS       T09181                                 
Symbol
pdhD
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
amav  Agromyces mangrovi
Pathway
amav00010  Glycolysis / Gluconeogenesis
amav00020  Citrate cycle (TCA cycle)
amav00260  Glycine, serine and threonine metabolism
amav00280  Valine, leucine and isoleucine degradation
amav00310  Lysine degradation
amav00380  Tryptophan metabolism
amav00620  Pyruvate metabolism
amav00630  Glyoxylate and dicarboxylate metabolism
amav00640  Propanoate metabolism
amav00670  One carbon pool by folate
amav00785  Lipoic acid metabolism
amav01100  Metabolic pathways
amav01110  Biosynthesis of secondary metabolites
amav01120  Microbial metabolism in diverse environments
amav01200  Carbon metabolism
amav01210  2-Oxocarboxylic acid metabolism
amav01240  Biosynthesis of cofactors
Module
amav_M00009  Citrate cycle (TCA cycle, Krebs cycle)
amav_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amav_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
amav_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:amav00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    GCM10025877_32530 (pdhD)
   00020 Citrate cycle (TCA cycle)
    GCM10025877_32530 (pdhD)
   00620 Pyruvate metabolism
    GCM10025877_32530 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    GCM10025877_32530 (pdhD)
   00640 Propanoate metabolism
    GCM10025877_32530 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    GCM10025877_32530 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    GCM10025877_32530 (pdhD)
   00310 Lysine degradation
    GCM10025877_32530 (pdhD)
   00380 Tryptophan metabolism
    GCM10025877_32530 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    GCM10025877_32530 (pdhD)
   00670 One carbon pool by folate
    GCM10025877_32530 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amav04147]
    GCM10025877_32530 (pdhD)
Enzymes [BR:amav01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     GCM10025877_32530 (pdhD)
Exosome [BR:amav04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   GCM10025877_32530 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like DAO GIDA AlaDh_PNT_C FAD_oxidored NAD_binding_8 3HCDH_N FAD_binding_2 Amino_oxidase Trp_halogenase FAD_binding_3 2-Hacid_dh_C NAD_binding_9
Other DBs
NCBI-ProteinID: BDZ66315
LinkDB
Position
complement(3376452..3377846)
AA seq 464 aa
MRKGDIRVSEQNFDIVVLGGGSGGYAAALRAVQLGFSVALIEKDKLGGTCLHRGCIPTKA
LLHAAEIADGAKESEKFGVKASFEGIDMPAVNAYRDGVVSSKWKGLQGLVKARGITVVEG
EGRLTSPTTVEVGDQTITGKNVVLATGSYSRTLPGLEIGGRVITSETALQLEWVPRRVAV
LGGGVIGVEFASVWRSFGADVTIIEALPHLVPNEEESVSKQLERAFRKRGIEYKLGTRFQ
GVTQDDSGVVVTLEDGSTVEADLLLVAVGRGPATHNLGYEEVGIEMDRGFVLTNDRLETS
VPGVYAVGDIVPGLQLAHRGFQQGIFVAEELAGQNPIVVDDVNIPKVTYCDPEVASVGYT
EAKAKEQFGDDKVSSYEYNLGGNGKSHILGTSGSIKVVRVEDGPVVGVHMIGARVGELIG
EAQLAVNWEAYPEDVAPLLHAHPTQNEALGEAFLKLAGKPLHAM
NT seq 1395 nt   +upstreamnt  +downstreamnt
gtgcgcaagggagatatccgggtgtccgagcagaattttgacatcgtcgttctcggtgga
ggcagcggagggtacgccgcggcgttgcgcgccgtgcaactcggtttcagcgtcgcgctc
atcgagaaggacaagctcggcggcacgtgcctgcaccgcggctgcatcccgaccaaggcc
ctgctgcacgcggccgagatcgccgacggcgccaaggagtccgagaagttcggcgtcaag
gcgtcgttcgagggcatcgacatgcccgccgtgaacgcctaccgcgacggcgtggtctcg
agcaagtggaagggcttgcagggcctcgtcaaggcgcgcggcatcacggtcgtcgagggc
gagggccgtctcacctcgccgaccaccgtggaggtcggcgaccagaccatcaccggcaag
aacgtggtgctcgcgaccggctcctactcgcgcacgctgccgggcctcgagatcggcgga
cgcgtgatcacgagcgagaccgcgctgcagctggagtgggtgccccgtcgcgtcgccgtg
ctcggcggcggcgtcatcggcgtggagttcgcgagcgtctggcgctcgttcggcgccgac
gtgacgatcatcgaggcgctcccccacctcgtgccgaacgaggaggagtcggtctcgaag
cagctcgagcgggcgttccgcaagcggggcatcgagtacaagctcggcacgcgcttccag
ggcgtcacccaggacgacagcggcgtcgtcgtgaccctcgaggacggctcgaccgtcgag
gcggacctgctgctcgtcgcggtcggccgcggccccgccacccacaacctcgggtacgag
gaggtcggcatcgagatggaccgcggcttcgtgctcacgaacgaccgcctcgagaccagc
gtgcccggcgtctacgccgtgggcgacatcgtgcccggcctgcagctcgcgcaccgcggg
ttccagcagggcatcttcgtcgccgaggagctcgccggccagaacccgatcgtcgtcgac
gacgtcaacatcccgaaggtcacgtactgcgaccccgaggtcgcgtcggtgggctacacc
gaggcgaaggccaaggagcagttcggcgacgacaaggtgtcgagctacgagtacaacctc
ggcggcaacggcaagagccacatcctgggcacgagcggctcgatcaaggtcgtgcgcgtc
gaagacggccccgtcgtcggcgtgcacatgatcggcgcccgcgtcggcgagctcatcggc
gaggcccagctggccgtcaactgggaggcgtaccccgaggacgtcgccccgctgctgcac
gcgcacccgacgcagaacgaggcgctcggcgaggccttcctcaagctcgccggcaagccg
ctccacgcgatgtga

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