Agromyces mangrovi: GCM10025877_32530
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Entry
GCM10025877_32530 CDS
T09181
Symbol
pdhD
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
amav
Agromyces mangrovi
Pathway
amav00010
Glycolysis / Gluconeogenesis
amav00020
Citrate cycle (TCA cycle)
amav00260
Glycine, serine and threonine metabolism
amav00280
Valine, leucine and isoleucine degradation
amav00310
Lysine degradation
amav00380
Tryptophan metabolism
amav00620
Pyruvate metabolism
amav00630
Glyoxylate and dicarboxylate metabolism
amav00640
Propanoate metabolism
amav00670
One carbon pool by folate
amav00785
Lipoic acid metabolism
amav01100
Metabolic pathways
amav01110
Biosynthesis of secondary metabolites
amav01120
Microbial metabolism in diverse environments
amav01200
Carbon metabolism
amav01210
2-Oxocarboxylic acid metabolism
amav01240
Biosynthesis of cofactors
Module
amav_M00009
Citrate cycle (TCA cycle, Krebs cycle)
amav_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
amav_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
amav_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
GCM10025877_32530 (pdhD)
00020 Citrate cycle (TCA cycle)
GCM10025877_32530 (pdhD)
00620 Pyruvate metabolism
GCM10025877_32530 (pdhD)
00630 Glyoxylate and dicarboxylate metabolism
GCM10025877_32530 (pdhD)
00640 Propanoate metabolism
GCM10025877_32530 (pdhD)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GCM10025877_32530 (pdhD)
00280 Valine, leucine and isoleucine degradation
GCM10025877_32530 (pdhD)
00310 Lysine degradation
GCM10025877_32530 (pdhD)
00380 Tryptophan metabolism
GCM10025877_32530 (pdhD)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
GCM10025877_32530 (pdhD)
00670 One carbon pool by folate
GCM10025877_32530 (pdhD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amav04147
]
GCM10025877_32530 (pdhD)
Enzymes [BR:
amav01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
GCM10025877_32530 (pdhD)
Exosome [BR:
amav04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
GCM10025877_32530 (pdhD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
Pyr_redox_3
HI0933_like
DAO
GIDA
AlaDh_PNT_C
FAD_oxidored
NAD_binding_8
3HCDH_N
FAD_binding_2
Amino_oxidase
Trp_halogenase
FAD_binding_3
2-Hacid_dh_C
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
BDZ66315
LinkDB
All DBs
Position
complement(3376452..3377846)
Genome browser
AA seq
464 aa
AA seq
DB search
MRKGDIRVSEQNFDIVVLGGGSGGYAAALRAVQLGFSVALIEKDKLGGTCLHRGCIPTKA
LLHAAEIADGAKESEKFGVKASFEGIDMPAVNAYRDGVVSSKWKGLQGLVKARGITVVEG
EGRLTSPTTVEVGDQTITGKNVVLATGSYSRTLPGLEIGGRVITSETALQLEWVPRRVAV
LGGGVIGVEFASVWRSFGADVTIIEALPHLVPNEEESVSKQLERAFRKRGIEYKLGTRFQ
GVTQDDSGVVVTLEDGSTVEADLLLVAVGRGPATHNLGYEEVGIEMDRGFVLTNDRLETS
VPGVYAVGDIVPGLQLAHRGFQQGIFVAEELAGQNPIVVDDVNIPKVTYCDPEVASVGYT
EAKAKEQFGDDKVSSYEYNLGGNGKSHILGTSGSIKVVRVEDGPVVGVHMIGARVGELIG
EAQLAVNWEAYPEDVAPLLHAHPTQNEALGEAFLKLAGKPLHAM
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcaagggagatatccgggtgtccgagcagaattttgacatcgtcgttctcggtgga
ggcagcggagggtacgccgcggcgttgcgcgccgtgcaactcggtttcagcgtcgcgctc
atcgagaaggacaagctcggcggcacgtgcctgcaccgcggctgcatcccgaccaaggcc
ctgctgcacgcggccgagatcgccgacggcgccaaggagtccgagaagttcggcgtcaag
gcgtcgttcgagggcatcgacatgcccgccgtgaacgcctaccgcgacggcgtggtctcg
agcaagtggaagggcttgcagggcctcgtcaaggcgcgcggcatcacggtcgtcgagggc
gagggccgtctcacctcgccgaccaccgtggaggtcggcgaccagaccatcaccggcaag
aacgtggtgctcgcgaccggctcctactcgcgcacgctgccgggcctcgagatcggcgga
cgcgtgatcacgagcgagaccgcgctgcagctggagtgggtgccccgtcgcgtcgccgtg
ctcggcggcggcgtcatcggcgtggagttcgcgagcgtctggcgctcgttcggcgccgac
gtgacgatcatcgaggcgctcccccacctcgtgccgaacgaggaggagtcggtctcgaag
cagctcgagcgggcgttccgcaagcggggcatcgagtacaagctcggcacgcgcttccag
ggcgtcacccaggacgacagcggcgtcgtcgtgaccctcgaggacggctcgaccgtcgag
gcggacctgctgctcgtcgcggtcggccgcggccccgccacccacaacctcgggtacgag
gaggtcggcatcgagatggaccgcggcttcgtgctcacgaacgaccgcctcgagaccagc
gtgcccggcgtctacgccgtgggcgacatcgtgcccggcctgcagctcgcgcaccgcggg
ttccagcagggcatcttcgtcgccgaggagctcgccggccagaacccgatcgtcgtcgac
gacgtcaacatcccgaaggtcacgtactgcgaccccgaggtcgcgtcggtgggctacacc
gaggcgaaggccaaggagcagttcggcgacgacaaggtgtcgagctacgagtacaacctc
ggcggcaacggcaagagccacatcctgggcacgagcggctcgatcaaggtcgtgcgcgtc
gaagacggccccgtcgtcggcgtgcacatgatcggcgcccgcgtcggcgagctcatcggc
gaggcccagctggccgtcaactgggaggcgtaccccgaggacgtcgccccgctgctgcac
gcgcacccgacgcagaacgaggcgctcggcgaggccttcctcaagctcgccggcaagccg
ctccacgcgatgtga
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