Agromyces mangrovi: GCM10025877_33380
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Entry
GCM10025877_33380 CDS
T09181
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amav
Agromyces mangrovi
Pathway
amav03030
DNA replication
amav03430
Mismatch repair
amav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM10025877_33380
03430 Mismatch repair
GCM10025877_33380
03440 Homologous recombination
GCM10025877_33380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amav03032
]
GCM10025877_33380
03400 DNA repair and recombination proteins [BR:
amav03400
]
GCM10025877_33380
Enzymes [BR:
amav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM10025877_33380
DNA replication proteins [BR:
amav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GCM10025877_33380
DNA repair and recombination proteins [BR:
amav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GCM10025877_33380
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BDZ66400
LinkDB
All DBs
Position
3457942..3458640
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AA seq
232 aa
AA seq
DB search
METLRRTWTDRLAVFDLETTGVDPDTCRIVTAHLGVLDGEGHVIGAHDWLLDPGVEIPAE
ASAIHGVTTARARAEGMRAHEGVAQLVDAIAHLLSTGVPLVAYNAAYDLTVLDREARRYA
VPPLDAPAPVIDPYVIDKALDRYRRGKRTLSVTAAHYGVDLDAAHEASADAIAAGRVALA
LAGAFPELLAVELPELHARQVGWARDQAASYQAWRRANGSPEFTTSGAWPLR
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtggagaccctgcgacgcacctggaccgaccgactcgccgtgttcgacctggagacgacg
ggcgtcgatcccgacacgtgccgcatcgtcacggcgcacctcggggtgctcgacggcgag
gggcacgtgatcggcgcgcacgactggctgctcgatcccggcgtggagatccccgctgag
gcgtccgcgatccacggcgtcacgacggcgcgtgcgcgggccgagggcatgcgcgcgcac
gagggcgtcgcgcagctcgtcgacgcgatcgcccacctgctctcgaccggcgtgccgctc
gtggcgtacaacgccgcctacgacctcaccgtgctcgaccgcgaggcccgccggtacgcg
gtgccgccgctcgacgctccggcccccgtgatcgacccgtacgtcatcgacaaggcgctc
gaccgctaccgtcgcggcaagcgcacgctctcggtcaccgcggcgcactacggcgtcgac
ctcgacgccgcgcacgaggcatccgccgacgccatcgccgcgggccgcgtcgccctcgcg
ctcgccggggcgttccccgagctgctcgccgtcgagctgcccgagctgcacgcgcgtcag
gtcgggtgggcgcgcgaccaggccgccagctaccaggcgtggcgtcgcgcgaacggcagc
cccgagttcacgacgtcgggcgcctggccgctccgctga
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