Agromyces mangrovi: GCM10025877_34220
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Entry
GCM10025877_34220 CDS
T09181
Symbol
polA
Name
(GenBank) DNA polymerase
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amav
Agromyces mangrovi
Pathway
amav03030
DNA replication
amav03410
Base excision repair
amav03420
Nucleotide excision repair
amav03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GCM10025877_34220 (polA)
03410 Base excision repair
GCM10025877_34220 (polA)
03420 Nucleotide excision repair
GCM10025877_34220 (polA)
03440 Homologous recombination
GCM10025877_34220 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amav03032
]
GCM10025877_34220 (polA)
03400 DNA repair and recombination proteins [BR:
amav03400
]
GCM10025877_34220 (polA)
Enzymes [BR:
amav01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GCM10025877_34220 (polA)
DNA replication proteins [BR:
amav03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GCM10025877_34220 (polA)
DNA repair and recombination proteins [BR:
amav03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GCM10025877_34220 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GCM10025877_34220 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
BDZ66484
LinkDB
All DBs
Position
complement(3544167..3546278)
Genome browser
AA seq
703 aa
AA seq
DB search
MGETSDNLPGITKVGEKTAVKWLKQFGDLDGVLEHADEIKGVAGNNLRAEMDNAVRNRRL
NRLVDDLELDVTLDELAAKPIDTDAVTAIFSRLEFRTLLERVMKLAGEEQGADAAAGTPA
PAASAAPTAPAPRTLLDEELDVWLDRQVAAHPDGLGLTIEMLDGKVIGAGVSGAEESVFL
PWQPGRRDYAPFEAWLAGDAPKVMTDAKPQVKAMRRSGLAFGGLALDTLVATWLVNPLAQ
EKGLADVVFRYLGETLPTADPAQLVPDETRAAGPAELAWYTFRAAPVVLAELPASTLPVC
TDIEMPILGVLADMELRGVTVDHDELSALSGQLGDRAADIASRAFAEIGREVNLGSPKQL
QEVLFDQLGMPKTRATKTGYSTDAGALADLQEKSPHPFLGLLLEHRDATKLRQIVESLDK
SIGGDGRIHTTYVQIGTSTGRIASTDPNLQNIPVRTGEGRRIREAFRHGPEFETLLTADY
SQIEMRIMAHLSGDPGLIEAFHAGEDLHRFVGARIFGVEPADVTPLMRTKVKAMSYGLAY
GLSAFGLSKQLRIEQSEAKQLMVDYFARFGAVRDYLRDVVAQAKVDGYTETIFGRRRPFP
DLSSPNRVLRENAERAALNAPIQGSAADIMKIAMLGIERDVADAGLASRMLMQVHDELIF
EVAAGEGEQLEEIVQRRMATAADLQVPLDVQLGHGPNWDAAAH
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
gtgggcgagacgagcgacaacctgcccggcatcacgaaggtcggcgagaagacggccgtg
aagtggctgaagcagttcggcgacctcgacggggtgctcgagcacgccgacgagatcaag
ggagtcgcgggcaacaacctgcgcgccgagatggacaacgcggtgcgcaaccggcgcctc
aaccgcctcgtggacgacctcgagctcgatgtgaccctcgacgaactggccgcgaagccg
atcgacaccgatgcggtgaccgccatcttctcccgcctcgagttccgcacgctgctggag
cgcgtgatgaagctcgcgggcgaggagcagggggcggatgccgctgccggcacgcccgct
ccggcggcatccgccgcgccgacggcgcctgcgccgcgcacgctcctcgacgaggagctc
gacgtgtggctcgaccggcaggtggccgcgcacccggacggcctcggtctcacgatcgag
atgctcgacggcaaggtcatcggcgcgggcgtctcgggcgccgaggagtcggtgttcctg
ccctggcagcccggccggcgcgactacgcgccgttcgaggcgtggctcgcgggcgacgcg
ccgaaggtcatgaccgacgcgaagccgcaggtcaaggccatgcgccgatccgggctggcg
ttcggcgggctcgcgctcgacacgctcgtcgcgacctggctcgtcaacccgctggcgcag
gagaaggggctcgccgacgtcgtcttccgctacctcggcgagacgctcccgacggcagac
ccggcccagctcgtgcccgacgagacccgagccgcgggcccggccgagctcgcctggtac
acgttccgcgcggcgcccgtggtgctcgcggagctgcccgcgtcgacgctgccggtctgc
accgacatcgagatgcccatcctgggggtgctcgccgacatggagctgcgcggagtcacc
gtcgaccacgacgaactgtcggcgctctccggccagctcggcgatcgcgccgccgacatc
gcctcccgcgcgttcgccgagatcggccgagaggtcaacctcggctcgcccaagcagctg
caggaggtgctcttcgaccagctcggcatgccgaagacgcgtgcgacgaagacggggtat
tcgacggatgccggtgcgctggccgacctccaggagaagagcccgcacccgttcctgggc
ctcctgctcgagcaccgtgacgcgacgaagctgcggcagatcgtcgagtcgctcgacaag
tcgatcggcggcgacggtcgcatccacacgacctacgtgcagatcggcacgagcacgggg
cgtatcgcgtcgaccgacccgaacctgcagaacatcccggtgcgcacgggggaggggcgg
cgcatccgcgaggcgttccgccacgggcccgagttcgagaccctgctgaccgccgactac
tcgcagatcgagatgcgcatcatggcgcacctctcgggcgaccccggcctgatcgaggcg
ttccacgcgggagaagacctgcaccggttcgtcggcgcacgcatcttcggcgtcgagccg
gccgacgtgaccccgctgatgcgcaccaaggtgaaggccatgtcgtacgggctcgcctac
gggctgagcgcattcgggctctccaagcagctgcgcatcgagcagtccgaggcgaagcag
ctcatggtcgactacttcgcgcggttcggcgcggtgcgcgactacctgcgcgacgtcgtg
gcgcaggcgaaggtcgacggctacaccgagacgatcttcgggcggcgccgcccgttcccc
gacctgtcgagcccgaaccgggtgctgcgcgagaacgcggagcgcgcggcgctgaacgcg
ccgatccagggctccgcggccgacatcatgaagatcgccatgctcggcatcgagcgcgac
gtcgccgatgcggggctcgcgtcgcgcatgctcatgcaggtgcacgacgagctcatcttc
gaggtcgcggcgggcgagggcgagcagctcgaggagatcgtgcagcggcgcatggcgacc
gcggccgacctgcaggtgccgctcgacgtgcagctcgggcacggcccgaactgggacgcg
gcggcgcactga
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integrated database retrieval system
