Ahrensia marina: ABWH92_01820
Help
Entry
ABWH92_01820 CDS
T10849
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
amax Ahrensia marina
Pathway
amax03030
DNA replication
amax03410
Base excision repair
amax03420
Nucleotide excision repair
amax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABWH92_01820 (polA)
03410 Base excision repair
ABWH92_01820 (polA)
03420 Nucleotide excision repair
ABWH92_01820 (polA)
03440 Homologous recombination
ABWH92_01820 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amax03032
]
ABWH92_01820 (polA)
03400 DNA repair and recombination proteins [BR:
amax03400
]
ABWH92_01820 (polA)
Enzymes [BR:
amax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABWH92_01820 (polA)
DNA replication proteins [BR:
amax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABWH92_01820 (polA)
DNA repair and recombination proteins [BR:
amax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABWH92_01820 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABWH92_01820 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
HHH_5
WHD_BrxR
HHH_2
Motif
Other DBs
NCBI-ProteinID:
XHC42104
LinkDB
All DBs
Position
complement(375141..378044)
Genome browser
AA seq
967 aa
AA seq
DB search
MTDTKNRPLSSDDHLMLVDGSTYIFRAYHALPPLTRKSDGLPVGAVSGFCNMLWKLLAEP
DPELLGSPPTHFAVIFDHSSYSFRNDIYPDYKAHRPEPPEDLRPQFPIIRDATRAFNVAC
IEQEGYEADDLIATYTTQAVEAGAHVSIISSDKDLMQLLTMPNVVLVDTMKDKRTGPDGV
VEKFGVPPEKMIDLQSLAGDSVDNVPGVPGIGVKTAAQLLEEFGDLETLLAQAETIKQNK
RRENLIEFADQARVSKKLVTLKPDVPVKEPLETTLVRDLDGEQLIGFLKAMEFTTLTRRV
ATKTETSTDDVQSASVSTHGFEGAKVEERVKAEGEMTPAALAEKRANEAASVTIDPSKYE
AVFDPAKLEALFDEARWSGILAFDTETTSLDPMRAELVGFSFALEPGRAYYVPLIHTSGD
DLLGAGHDDRQMPADKALALLKAVLEDPAILKIGQNMKYDISIMANHDIAVAPFDDTMLL
SYVAGAGTGGHGMDELSSKWLGHTPIPYKEVAGSGKSMITFDKVPIDKATEYAAEDADIT
LLLWRALKPQLIPHKATTVYETLERPLVPVLARMERNGIKVDRQMLSRLSGDFAQGMAGL
EAEIAELAGEDFNVGSPKQLGDILFGKMGLPGGKKTKTGAWATPASALEDLAAEGHELPR
KVLDWRQLQKLRSTYTEALAQAINPDTGRVHTSFALAATTTGRLSSSDPNLQNIPVRTEA
GRKIRKAFIAEDGCKLVSADYSQIELRVLAHVADIDQLKQAFADGLDIHAMTASEMFNVP
IEGMDPIVRRQAKAINFGIIYGISAFGLANQLGIGRSEAGDYIKTYFERFPGIKQYMDDT
KAFCRDHGYVETIFGRRAHYPDIKASNPAMRAFNERAAINAPIQGSAADIIRRAMIRMEP
ALAEAKLNAKMLLQVHDELIFEVPESEVDATLPVIEKVMIDASNPALKLSVPLEVDARAA
DNWDDAH
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacacgaaaaaccgcccgctcagctccgacgaccatctcatgttggtcgatggc
tccacttacattttccgcgcttaccacgcgctgccaccgcttacccgcaagtccgacggc
ttgccggtgggcgcggtgtcgggtttctgcaacatgctgtggaagctgttggcggaaccc
gatccggagctactgggctcgccgccgacgcattttgcggtgatcttcgaccattcctcc
tactcgttccgcaacgatatctatcctgactacaaggcccaccggcctgagccgccggaa
gatctgcgtccacaattcccgattatccgagacgccacccgtgccttcaacgtcgcgtgc
attgagcaggaaggctatgaagccgacgatctgatcgccacctacaccacccaggcggtg
gaggccggcgcgcatgtgtcgatcatttcctccgacaaggatctgatgcagctgctcacc
atgcccaatgtggtgctggtggacaccatgaaggacaagcgcaccggccccgacggagtg
gtggagaagtttggcgtgccgccggaaaagatgatcgaccttcagtcgcttgccggtgac
tcagtcgacaacgtgcccggtgtgcccggcatcggcgtaaagactgctgcccaactgctg
gaagagtttggcgatctggaaacactgctcgcccaggccgagaccatcaagcaaaacaag
cggcgtgaaaacctgatcgagtttgccgaccaggcccgtgtctccaaaaagctcgtcaca
ctgaagcctgatgtgccggtgaaagagccgctagaaaccactctggtccgcgacctggat
ggcgagcaactgattggcttcctgaaagctatggagttcaccacgctcacccgtcgcgtg
gcgaccaagaccgaaacatccactgacgacgtgcaaagcgcttcggtgtccacccatggg
tttgagggcgccaaagtcgaagaacgcgtcaaagccgaaggtgagatgacgcccgctgcg
ctggctgagaaacgcgccaatgaggccgcctccgtcacgatcgatccatcgaagtacgaa
gcggtgttcgatccagccaagctggaggccttgttcgatgaggcgcgatggtccggcatt
ttggcctttgacaccgagaccacctcgcttgacccgatgcgcgcggagcttgtcggcttc
tccttcgcgctggagcctggccgcgcctattatgtgccgctgatccacacctctggcgat
gatctactgggcgcaggccatgatgaccggcaaatgcctgctgataaagcgctggcgctt
ctgaaagctgttctggaagatcccgcgatcctgaagatcggccagaacatgaagtacgac
atctcgatcatggcgaaccacgacattgccgtcgcgccgttcgatgacacaatgctgctt
tcctatgtggcgggcgctggtaccggtggtcacggcatggatgagctgtcgtccaaatgg
ctgggccacacgccgatcccttacaaggaggtcgcaggctccggcaagtcgatgatcacc
ttcgacaaggtgcccatcgacaaggccaccgagtacgccgccgaggatgccgacatcaca
ctgttgctgtggcgagcactgaaaccccagcttattccccacaaagccaccaccgtttac
gagacgctggaacgcccactggtgcctgtgctggcgcgcatggagcgcaatggcatcaag
gttgatcgacagatgctgtcgcgcctgtcaggtgactttgcgcagggcatggccgggcta
gaagctgagatcgccgagcttgccggcgaagacttcaatgtcggttcgcccaagcagttg
ggcgatattctcttcggcaagatgggcttgccagggggcaagaaaactaagacgggtgct
tgggcaacacccgcttcggcgcttgaggacttggccgctgaaggccatgagttgcctcgc
aaggtgctcgactggcgccaactgcaaaagcttcgctccacctacaccgaggcgttagcg
caggcgatcaaccccgatacgggccgcgtgcacacaagctttgctttggctgcaaccacg
acggggcgactttcttcctccgatccgaacctgcagaacattccagtgcgcaccgaagcg
ggccggaaaatccgcaaggcgtttatcgctgaagatggctgcaaacttgtctctgccgac
tacagccagatcgagctgcgcgtgcttgcccatgtggcggatatcgaccagttgaagcag
gcctttgctgacgggctcgacatccacgctatgacggcatcagaaatgttcaatgtgccg
attgagggcatggaccccatcgtccgccgtcaggccaaggcgatcaatttcggcatcatt
tacgggatttccgcgttcggtctcgccaaccagctgggcatcgggcgctccgaggcgggt
gattacatcaagacctattttgagcgcttccctggcatcaaacagtatatggatgacaca
aaggcgttctgccgcgaccatggctatgtggagaccatctttggtcgccgggcgcactat
cccgatatcaaggcgagcaaccctgcgatgcgcgctttcaatgagcgcgcggcgattaac
gcgccgatccaagggtcagcggcagacatcattcgccgcgcgatgatccgcatggaaccg
gcgctggctgaggcaaagctgaacgccaagatgctgcttcaggtgcacgatgaactcatc
tttgaggtgcctgaaagcgaggtggacgccactttgccggtcatcgaaaaggtgatgatc
gatgcatccaacccggctctaaaactatccgtgccgctggaagtggacgcccgcgctgcc
gacaattgggatgacgcgcattag
DBGET
integrated database retrieval system
