Ahrensia marina: ABWH92_03855
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Entry
ABWH92_03855 CDS
T10849
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
amax Ahrensia marina
Brite
KEGG Orthology (KO) [BR:
amax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amax03016
]
ABWH92_03855 (truB)
Enzymes [BR:
amax01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABWH92_03855 (truB)
Transfer RNA biogenesis [BR:
amax03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABWH92_03855 (truB)
Prokaryotic type
ABWH92_03855 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
XHC42478
LinkDB
All DBs
Position
792191..793105
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AA seq
304 aa
AA seq
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MGRRKKGRKVSGWIILDKPVGVTSTHAVGRVRRLFDAQKAGHAGTLDPLASGVLPLALGE
ATKTVPYVMDGEKRYLFTVRWGIETSTDDTEGEPVATSDMRPDEEAILSILPRFVGTIDQ
VPPAFSAKKVDGERAYDLARDGEVVQLEPSQITIHDLAYLGSPDEDRALFEAHCGKGTYV
RALARDLGRALGTRGHVTSLRRTQVGPFDEHGTVTLDQLEAMESPEDCDALLTPMADALG
ELHEIQVVSGDAAKLRRGMSLLVRGPTAPANGEEAYAMDGDELIAIGVMDYGKFLPKRVI
VSAD
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
gtgggcagacggaaaaagggccggaaagtatccggctggatcatcctggataagccagtt
ggcgtgacctcaacgcatgccgtgggccgcgtgcgtcggttgtttgacgcgcagaaagca
ggtcacgctggcacgcttgatccgttggcatctggcgttcttccgctggcgttaggggaa
gccaccaaaaccgttccctatgtgatggatggcgagaagcggtatctttttaccgtgcgc
tggggcattgaaacctccacggatgacaccgaaggtgagccggtcgcaacaagcgatatg
cgccccgatgaggaggctattctttcgatcctgccgcgttttgtagggaccattgatcag
gttccgcctgccttttccgccaagaaagtggatggcgagagggcctacgatctggcgcgc
gatggcgaagtggtgcagctggaaccgagccaaatcacaatccatgatttggcctatctt
ggctcgccggatgaagatcgcgccctgtttgaagcgcattgcggcaaaggcacgtatgtg
cgcgctcttgcccgcgacctcggccgagcattgggcacacgtgggcatgtgaccagcctg
cgccgcacgcaggttggcccgttcgatgaacacggcaccgtgacattggatcaattggaa
gccatggagagccccgaggattgtgatgcattgctcacacccatggccgatgctctgggc
gagctgcacgaaattcaggtggtatcgggcgatgcagccaagcttcgccggggcatgagc
ttgctcgttagagggccaaccgcgccggccaatggcgaagaagcctatgcgatggatggc
gatgaactgatcgccatcggcgtgatggactatggcaagtttttgcctaaacgcgtgatt
gtgtcggcggattga
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