Ahrensia marina: ABWH92_03865
Help
Entry
ABWH92_03865 CDS
T10849
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
amax Ahrensia marina
Pathway
amax03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amax00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABWH92_03865 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amax03019
]
ABWH92_03865 (pnp)
03016 Transfer RNA biogenesis [BR:
amax03016
]
ABWH92_03865 (pnp)
Enzymes [BR:
amax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ABWH92_03865 (pnp)
Messenger RNA biogenesis [BR:
amax03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ABWH92_03865 (pnp)
Transfer RNA biogenesis [BR:
amax03016
]
Prokaryotic type
tRNA degradation factors
ABWH92_03865 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
aRib
Motif
Other DBs
NCBI-ProteinID:
XHC42480
LinkDB
All DBs
Position
794015..796141
Genome browser
AA seq
708 aa
AA seq
DB search
MFNHHKISLDWGGRELTLESGKVARQADGAVIATYGETTVIATVVSAHAPKPGLDFFPLT
VNYQEKYYAAGRIPGGFFKREGRPTEKETLVSRLIDRPIRPLFVDGYKHETQVICTCMSY
DMENDPDMLAMVAASAALTLSGVPFMGPIGGTRVGRLNGEFVLNPTIDQMEDTELDLVVA
GTSDAVLMVESEAKELDEATMLEAVMFGHKGFQPVIDAIIQLAEKCAKEPRDFQPEDLSE
LYDAVSGMVSDDLAAAYAITTKVERQAAVGAARDKVMATFFPEGADAPVWTETQVKTVFK
KVEAATVRGNILKTKSRIDGRDLVTVRQIESEVGVLPRTHGSALFTRGETQAIVVATLGT
GDDEQMIDGLDGLHYGNFMLHYNFPPFSVGEAGRIGSPGRREIGHGKLAWRAINPMLPAK
TEFPYTLRVVSEITESNGSSSMATVCGTSLALMDAGVPLKAPVAGIAMGLIKEGDEFAVL
SDILGDEDHLGDMDFKVAGTANGITSLQMDIKIDGITEEIMQIALDQAKGGRMHILGEMA
KALGEARAELGEFAPRIEQLSIPTDKIRDVIGSGGKVIREIVEKTGAKINIEDDGTVKVA
SSDGKSIEAAIKWIKSITDDPEEGAIYQGTVVKTVDFGAFVNFFGPKDGLVHISQLAPER
VKQTTDIVKEGDKVWVKLLGFDDRGKVRLGMKMVDQETGEEITEGDDD
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgttcaatcatcataaaatcagcctcgattggggcggccgtgaactaacgctggaatcg
ggcaaggtcgcccgccaggcagacggcgctgttatcgccacctatggcgaaaccactgtg
atcgcgaccgttgtctcggcgcacgcacccaagccgggcctcgatttcttcccgctgacg
gtgaactatcaggaaaaatattacgctgccggccgcattcctggcggtttcttcaagcgc
gaaggtcgtccgactgaaaaagagacgctcgtctcccgcctgatcgaccgtccgatccgt
ccgctatttgtggacggttacaagcacgaaacccaagtgatctgtacctgcatgtcctac
gacatggaaaacgatccagacatgctggccatggtggcagcttctgctgcgctcacgctg
tccggcgtgccgttcatggggccaatcggtggcacacgtgttggccgcctcaacggtgag
ttcgtgctcaacccaaccatcgatcagatggaagacaccgagcttgatctggtcgtcgcc
ggtacatccgatgccgttctgatggtggaatccgaagccaaagagctggacgaagccacc
atgcttgaagctgtgatgtttggtcacaaaggcttccagccggtgatcgacgcgatcatc
cagctggccgaaaagtgcgccaaagaaccacgcgacttccagccggaagatctctcagaa
ctctatgacgctgttagcggcatggtttctgacgatctggccgctgcttatgcgatcacc
accaaggtggagcgtcaggctgccgttggcgcagcacgcgataaggtgatggccacgttc
ttcccagaaggggcagacgcaccggtttggaccgaaacgcaggtcaaaaccgtgttcaaa
aaggttgaagcggcaaccgttcgcggcaacatcctcaaaaccaagagccgcattgatggc
cgtgacctcgtcacggtgcgtcagatcgaaagtgaagtaggcgttctgcctcgcacacac
gggtctgcgctgttcacccgtggcgaaacacaggcgatcgttgtcgctacactcggcacc
ggcgatgatgagcagatgatcgacgggctggatggcctgcactatggcaacttcatgctg
cactacaacttcccaccattctcggttggtgaagctggccgcatcggttcgccgggtcgt
cgcgagatcggccacggcaagcttgcctggcgtgcgatcaatccgatgctgccagcgaaa
acggagttcccgtacacgctgcgcgtggtgtcggagatcaccgaatccaacggttcctcc
tcgatggcaaccgtttgcggcacatcgctggcactgatggatgcgggcgttccgctgaaa
gcaccggttgccggtattgccatgggtctcatcaaggaaggcgatgagtttgctgttttg
tccgatatcctgggtgatgaagatcatcttggcgatatggacttcaaagtggccggtacg
gccaacggcatcacctcgcttcagatggacatcaagatcgatggcatcaccgaagaaatc
atgcagatcgcgcttgatcaggccaaaggcggccgcatgcacattcttggtgaaatggcc
aaagcgctgggtgaagcccgcgctgagcttggcgagttcgctccacgcatcgagcagctt
tccatcccaaccgacaagatccgtgatgtgatcggttccggcggtaaggtgatccgtgag
atcgttgaaaaaaccggcgctaagatcaacatcgaagatgatggcaccgtgaaggtggcg
tcttccgacggcaaatcgatcgaagctgctatcaagtggatcaaatcgatcaccgatgat
ccggaagaaggcgcgatctatcaaggcacggttgttaaaaccgtcgactttggtgctttc
gtcaatttctttggtccgaaagacggcctggtgcacatctctcagctggcaccggagcgc
gtgaagcagaccaccgacatcgtcaaagaaggcgacaaggtgtgggtcaagcttcttggc
tttgatgatcgcggtaaagtccgcctcggcatgaagatggtcgaccaggaaaccggtgaa
gaaatcaccgagggtgacgacgactaa
DBGET
integrated database retrieval system
