Ahrensia marina: ABWH92_08420
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Entry
ABWH92_08420 CDS
T10849
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
amax Ahrensia marina
Pathway
amax02020
Two-component system
amax02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
amax00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ABWH92_08420
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ABWH92_08420
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
amax02022
]
ABWH92_08420
02035 Bacterial motility proteins [BR:
amax02035
]
ABWH92_08420
Two-component system [BR:
amax02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
ABWH92_08420
Bacterial motility proteins [BR:
amax02035
]
Flagellar system
Flagellar assembly proteins
Others
ABWH92_08420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
Response_reg
AAA
AAA_3
AAA_19
AAA_16
MCM
ICL
AAA_18
AAA_7
AAA_22
HTH_Tnp_ISL3
AAA_2
HTH_28
Myosin_head
Motif
Other DBs
NCBI-ProteinID:
XHC43316
LinkDB
All DBs
Position
complement(1714938..1716314)
Genome browser
AA seq
458 aa
AA seq
DB search
MRLLIFGNLGGQMASATRMAMERGAKVIHADDQATALDALRGGQAIDLVMVDVAENIKTL
IQAMEREHISAPVIACGVKNDADAAVKAIKDGAREYIPLPPDPALIAAVLAAVTTEELDM
VSTDPAMVKVVRLAEQIAPSDASIMITGESGTGKEVMARYVHTKSNRAIMPFVSVNCAAI
PENLLESELFGHEKGAFTGALARRIGKFEEASGGTLLLDEISEMDVRLQAKLLRALQERV
IDRVGGSKPVPVDLRIIATSNRNLADAVKEGTFREDLLFRLNVVNLALPALRDRPADILA
LSDHFAKKYAKANGFPLRPISEPARTRLMSAHWQGNVRELENTIHRAVLLASGPEIGPEA
LITPDGADFAAQAAPSSSAVQKAAMTAEAVTRALVGRTVAEVEQELILDTLDHCLGNRTH
AANILGISIRTLRNKLNDYASQGVSVPQPGQARVMQAG
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgcgacttctcatcttcggcaatctcggcggacaaatggccagcgcgacgcgcatggcg
atggagcgcggtgccaaagtcatccatgccgacgatcaggccactgcgcttgatgcgttg
cgtggtgggcaagccatcgacttggtgatggtcgatgttgcggagaacatcaaaacgctg
atccaagcgatggaacgcgagcatatctccgcacctgttattgcctgcggtgtgaaaaac
gacgccgacgcggcggtcaaagccatcaaagatggcgctcgcgagtacattccgctgccg
ccagaccctgcgcttatcgctgctgttctggccgctgttaccaccgaagagctggatatg
gtgtcaaccgatccggcgatggtgaaagtggtccgccttgccgaacaaatcgccccatct
gatgcttccatcatgatcaccggcgagtcgggcaccggtaaagaggtcatggcccgctac
gtgcacaccaaatcgaaccgcgcaatcatgccgtttgtttccgtcaactgcgcggcgatc
ccagaaaacttgctggagtctgagcttttcggtcacgagaaaggtgccttcactggcgca
ctggcccgccgcatcggcaagtttgaagaggcctccggtggcacacttttgctggatgag
atttccgaaatggacgttcgcctgcaagccaaactgctgcgggctttgcaagaacgcgtc
atcgacagggttggcggatcgaagccagtgccggtggacttgcgcatcattgcaacctcc
aaccgcaatttggctgacgctgtcaaagagggcacgttccgcgaagatttgttgttccgc
ctcaacgttgtgaatcttgccctaccagcactgcgtgatcgtccggccgacattcttgcg
ctctctgatcactttgcgaagaagtacgccaaggccaacggctttccactacgcccgatt
tctgaaccagcgcgcacacgcctgatgtcggcgcactggcaaggcaatgtgcgcgagctg
gagaacaccatccaccgtgccgtgcttttggcttccgggccggagatcggccccgaagcg
ttgatcacccctgacggagcggactttgccgcccaagcagcaccatcatcaagcgcggtc
caaaaagcagccatgactgccgaagcggtcacccgcgcattggtcggccgcactgtagca
gaggttgagcaagagctgatcctcgacacgctggatcattgcctgggcaaccgcacccat
gcggccaacatattgggcatctctatccgcacattgcgcaacaagctgaacgactacgca
tcgcaaggcgtctctgtgccccagcctggtcaagcacgggtgatgcaggcgggttag
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