Ahrensia marina: ABWH92_15690
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Entry
ABWH92_15690 CDS
T10849
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
amax Ahrensia marina
Pathway
amax03410
Base excision repair
amax03430
Mismatch repair
amax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABWH92_15690 (recJ)
03430 Mismatch repair
ABWH92_15690 (recJ)
03440 Homologous recombination
ABWH92_15690 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amax03400
]
ABWH92_15690 (recJ)
DNA repair and recombination proteins [BR:
amax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ABWH92_15690 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABWH92_15690 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABWH92_15690 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
XHC41212
LinkDB
All DBs
Position
complement(3226409..3228202)
Genome browser
AA seq
597 aa
AA seq
DB search
MRSSISTDDAALVLKVARSIGGQRWLRRLERDDPRPFAIQEAAGLNAILAKVLAGRGEDG
HTAADVLNPTLRTLMPDPSVLRAMEDAAGLLADAVEAQATVGLFGDYDVDGAASCALMAR
WLLTLGVAPIVHIPDRVSEGYGPNITAIDGLAEQGIDLLITLDCGATSHEALAHAQTRGL
PVLVLDHHQMRDLGPPVEALVNPNRPDDTSGLGHLCAAGVTFMALVAANRELRNRGYDRN
TLPDLLQLLDLVALATVADVVPLTGLNRAFVVKGLQVAQGQTNAGLAALIAASRLSGPLR
PYHFGFVLGPRINAGGRIGDAAMGARLLMSTDSDEARALAAELDTLNAQRQAIETEAVES
AIAMVERVGDVPPVIMVRDDTWHQGVVGLIAARLKERFHRPALAFTLTPDGTWTGSARSV
PGIDIGQAVHGLVEAGHAAKGGGHAMAAGLTLVDSAWSDAQNALVDALNKASDHAAATRT
LDVDAVLTASAASLDLTGAIESAAPYGTGFPEPVFAFASHRVTYAGVVGTNHIKVTLSDG
QGPGLAAIAFRAAETPLGDALMAARGGGPLHVAGTLSINSWQGRETVQLRIRDVANP
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
ttgagaagttccatctcgactgatgatgccgcgcttgttttaaaagttgctcgttccatc
ggcgggcaacgctggttgcgccgtctggaacgggatgatccacgtccttttgcgatccag
gaagcggcaggcctcaatgccatcctcgctaaggttttggctggtcgtggcgaggatggt
cacacagctgccgatgttttgaaccccaccttgcgcacactgatgcccgatccttcggtg
ctacgagcaatggaagatgcggctggccttcttgccgatgcggtggaagcgcaggcaact
gtgggtctctttggcgactatgatgtggatggtgcagcatcctgtgcgctgatggcccgc
tggctgttgacacttggggttgcgccaattgtacacatcccagaccgtgtttctgaaggt
tatggccccaacatcacggccattgatggtttggctgagcagggcattgacctactgatc
acactggattgtggcgccaccagccatgaggcgcttgcccacgctcagacacgcggtctg
cctgttctggtgctcgaccatcatcagatgcgcgatctcggtccgccggtcgaagccttg
gtgaaccccaatcgtcccgatgacacctccggtcttggccatttatgtgcggccggtgtg
acgtttatggcgctggttgctgctaaccgtgagctgcgcaaccgtggttatgaccggaac
acgctgcccgatctgcttcaactcctagaccttgtggctttggcaactgtcgcggatgtg
gtgccgctcactggccttaaccgggcctttgtggtgaagggccttcaggttgcacaaggg
caaaccaatgcgggccttgctgcattgatcgcggcatcaaggctttcgggccctctgcgt
ccttatcattttggtttcgtgctcgggccacgcatcaacgcaggtggtcgtattggcgat
gctgccatgggtgcgcggttgctgatgagtacggattccgatgaggcccgtgcactggca
gccgaactcgacacgttgaacgcacaacgccaagcgatcgaaaccgaagcggttgagagt
gccatcgcgatggtcgagcgcgttggagatgtgccgccggtcatcatggtgcgcgatgac
acatggcatcaaggtgtggttggcttgattgcagcgcgcctgaaagagcgattccatcga
cccgctttggccttcacactgacgcccgatggcacttggaccggatcggcccgatccgtc
cccggcattgatattgggcaggctgttcatgggctggtcgaggccgggcatgcggcaaag
ggcggcggccacgcgatggcggcagggctgacactggtcgattcagcttggagcgacgcg
caaaacgctttggtggatgccctcaacaaagcatctgaccatgcagcagccacgagaact
ctagacgtggacgcggtactcaccgccagcgctgcctcgcttgacttgaccggcgccatt
gaaagcgcagcgccttatggaacaggatttcccgagccagtgtttgcctttgccagtcac
cgcgtgacctacgctggcgtggtgggcaccaaccacatcaaagtcacattgtcggacggg
cagggacctggcctggctgcgatcgcctttcgagccgctgagaccccacttggcgatgct
ttgatggcggcccgcggtggcgggccccttcatgttgctggaacgctatcgatcaacagc
tggcagggtcgtgaaacagtgcaactgcgcatccgtgatgtcgccaacccttga
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