Ahrensia marina: ABWH92_17005
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Entry
ABWH92_17005 CDS
T10849
Name
(GenBank) helicase HerA-like C-terminal domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
amax Ahrensia marina
Brite
KEGG Orthology (KO) [BR:
amax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amax03400
]
ABWH92_17005
DNA repair and recombination proteins [BR:
amax03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
ABWH92_17005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
ResIII
FtsK_SpoIIIE
AAA_30
T2SSE
TrwB_AAD_bind
AAA_19
Hydrolase
AAA_7
nSTAND3
DUF5852
CbiA
TraG-D_C
Motif
Other DBs
NCBI-ProteinID:
XHC41459
LinkDB
All DBs
Position
complement(3509474..3511156)
Genome browser
AA seq
560 aa
AA seq
DB search
MYKDDAIYLGTASSDTDTPAPQHLALKLANRHGLITGATGTGKTVTLQIMAEGFSRAGVP
VFCADVKGDLSGIAVAGTEKDFLEARAETIGFKDEYTYEATPTIFWDLFGEKGHPIRTTI
SEMGPLLLSRLMDLNETQEGVLNIAFRIADEEGLMLLDLKDLRAMLLNLDERKDEISAKY
GNVSTASIGAIQRRLLVLEDQGGANFFGEPALKIADFMRTHTDGRGIVSVLAADKLMNNP
RLYATFLLWLLSELFEELPEVGNPDKPRVVFFFDEAHLLFDEAPKALLERVEQVCRLIRS
KGVGVYFVTQNPLDVPDEVLSQIGNRVQHALRAFTPRDQRAVKAAAETFRPNPELDAFEV
ITQLGVGEALVSTLEKKGVPSIVQRTLIRPPSSRLGPLEDDERAEHMKTSPVLGQYDEAV
DRESAYEILKKRGEDAAAAEARALQEEEERKAREKEEKERARRRDDYEDDDDYDDRRSGS
RRTRSGFDIPEFGPRSRNYDYGERDSRRTERRTSSRSSSSRRRRSSRQTPTEAMMKSIMR
SAGTQIGRAVVRGILGSLRR
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtataaagacgatgccatctaccttggaaccgcaagctccgacaccgacacgcctgcg
cctcaacatctggcgttgaagcttgccaaccggcacgggctgatcaccggtgcaaccggt
acgggtaaaaccgtgaccttgcagatcatggcggagggtttttctcgcgcaggcgttccg
gtgttctgtgccgatgtcaaaggcgatctctccggcattgctgtcgctggcacagagaag
gattttttggaagcgcgcgccgaaaccatcggcttcaaggatgagtacacctatgaagca
acgccaacgatcttctgggatctgtttggcgaaaagggtcacccaatccgcacaacgatc
tcggaaatgggaccgctgcttctctcccgcctgatggatttgaatgagacgcaggagggc
gtgctcaacatcgccttccgcatcgctgacgaagaaggcttgatgctgctcgacctgaaa
gatcttcgggcgatgctgctgaacctggatgagcgtaaggatgagatttcggccaagtac
ggcaatgtctctactgcctccatcggggcgatccagcgtcgcttgttggtgctggaagac
cagggtggggccaatttcttcggcgaaccggcgctaaaaatcgctgatttcatgcgcacg
cacaccgatggccgtggcatcgtgtcggtgctggccgccgataagctgatgaacaatccg
cgcctctacgcaaccttcctgttgtggttgctttcggagctttttgaggaacttccagag
gtcggcaatccagacaaaccacgcgttgtgttcttcttcgatgaagcgcatctgctcttt
gatgaggcgcccaaggcgctgctggaacgcgtggagcaagtgtgtcgcttgatccgctcg
aagggtgtcggcgtctacttcgtcacccaaaaccccttggatgtgccagatgaggtgctc
agccaaatcggcaaccgcgtgcagcatgctctgcgtgccttcaccccgcgcgatcaacgc
gctgtgaaagccgccgctgaaacgttccgccccaaccccgaactcgatgcgtttgaggtg
atcacccagcttggcgtcggcgaggcgctggtttcaacgctggagaaaaagggcgtgccg
tccatcgtgcagcgcacgctgattcgcccgccatcctcgcgccttggcccgcttgaggac
gatgagcgtgccgagcacatgaaaacctcaccggttcttggccagtacgacgaagccgtc
gaccgcgagtccgcgtatgaaatcttgaagaagcgtggtgaggatgcggcagccgccgag
gcgcgcgccctgcaagaggaagaagagcgcaaggcccgggagaaggaagagaaagaacgt
gcccgtcgtcgtgacgactatgaagatgacgatgactacgatgatcgccggtccggcagc
cgtcgcacccgttctggcttcgatattcccgagtttggtccccgcagccggaactatgat
tatggtgagcgcgactcgcgccgaaccgagcgccgcacaagctcacgatctagctcatcc
cgtcggcgtcggtcttcccgccaaacgccaaccgaagcgatgatgaaatcgatcatgcgt
tcggctggtactcagattggtcgcgcggttgtgcgcggtattctgggtagcctgcggcgt
tag
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