Actinomadura madurae: LUW76_07695
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Entry
LUW76_07695 CDS
T08933
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
amaz
Actinomadura madurae
Pathway
amaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LUW76_07695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amaz03400
]
LUW76_07695
Enzymes [BR:
amaz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LUW76_07695
DNA repair and recombination proteins [BR:
amaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LUW76_07695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
HHH_5
Viral_helicase1
AAA_11
Helicase_RecD
PhoH
AAA_22
NPHP3_N
DEAD
HHH_2
PIF1
nSTAND3
UvrD-helicase
UvrD_C
TraI_hel_assoc_N
AAA_16
NACHT
AAA_10
HTH_IclR
P-loop_TraG
AAA
DAP3
Motif
Other DBs
NCBI-ProteinID:
URM94222
LinkDB
All DBs
Position
complement(1604459..1606690)
Genome browser
AA seq
743 aa
AA seq
DB search
MPTPATPNATPRPAELEAVLERITYANEETGYTVARVATAKSGGDLLTVVGALLGAQVGE
SLRLVGRWRSHPKYGKQFEVDSYTTVLPATIQGIRRYLGSGMIKGIGPVMADRMVGHFGT
DILRIIEEEPERLVEVPGLGPKRTRRIADAWEEQKAIKEVMVFLQGVGVSTSLAVRIYKK
YGDESIGTVRERPYQLASDVWGIGFKTADTIAQAVGIPHDSPERIKAGLQYTLSEAADDG
HCFLPEPNLVTAAEKILGVPRELIVPALDELARDEGVVREPIPGAGEDAATIPAVYLVPF
HRAERSLARGLLDLLDAPTDRLKAFADVDWDRALPWLRQRTGQALAPEQEEAVKLALTSK
VAVLTGGPGCGKSFTVRSVVELAAAKKAKIVLVAPTGRAAKRLAELTGHEAATVHRLLQL
QPGGDPRFDQDDPLDADLVVVDESSMVDLILANKLVKAIPRGAHLLLVGDVDQLPSVGAG
EVLADLLGAEAIPRVRLTKIFRQAQRSGIVVNAHRVNSGDHPHTRGYDDFFLFPCEEQDE
AAEMTVDVVANRIPRRFGLDPRRDVQVLTPMHRGAAGAGTLNTMLQEALTPHDDARPERR
YGGRVFRVGDKVTQLRNNYDKGEAGVFNGTVGVVTSVSLEEQSLTVLTDEDESIDYAFDE
LDELAHAYAITIHRSQGSEYPAVVVPLTTGAWMMLRRNLLYTGMTRAKKLVVLVGSRRAL
AAAVRTAGAGRRHTALAHRLSQR
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
gtgccgacccccgcgacccccaacgccacgccgcgcccggcggagcttgaggcggtcttg
gaacggatcacgtacgccaacgaggagaccggctacaccgtcgcccgcgtggcgaccgcc
aagagcgggggcgacctgctcaccgtcgtcggcgcgctgctcggcgcccaggtgggggag
agcctgcgcctggtcgggcggtggcgctcgcatccgaagtacggcaagcagttcgaggtg
gactcgtacacgaccgtcctgccggcgacgatccagggcatccgccgctacctcggctcc
gggatgatcaaggggatcggcccggtgatggccgaccggatggtggggcacttcggcacc
gacatcctgcggatcatcgaggaggagccggagcgcctcgtcgaggtccccggcctcggc
ccgaagcgcacccggcggatcgccgacgcgtgggaggagcagaaggccatcaaggaggtg
atggtcttcctgcagggcgtcggcgtctccacctccctcgccgtccgcatctacaagaag
tacggggacgagtcgatcggcaccgtccgagagcgcccgtaccagctcgcgtcggacgtg
tggggcatcgggttcaagaccgccgacacgatcgcgcaggcggtcggcatcccgcacgac
agccccgagcggatcaaggcgggcctgcagtacacgctgtccgaggcggccgacgacggg
cactgcttcctgcccgagccgaacctggtcacggcggccgagaagatcctcggtgtgccg
cgcgagctgatcgttccggcgctggacgagctggcccgcgacgagggcgtcgtccgcgag
ccgatccccggcgccggggaggacgccgcgacgatcccggcggtgtacctggtgccgttc
caccgggccgagcggtccctcgcccgcgggctgctggacctgctggacgcgccgaccgac
cggctgaaggcgttcgcggacgtcgactgggacagagcgctcccgtggctcaggcagcgc
accggacaggccctcgcgcccgagcaggaggaggccgtcaagctcgcgctgacgtccaag
gtcgcggtgctgaccggcgggccgggctgcggcaagagcttcaccgtccggtccgtggtg
gaactcgccgcggcgaagaaggccaagatcgtcctggtggcgccgaccggccgcgccgcc
aagcggctcgccgagctgaccgggcacgaggcggcgaccgtccaccggctcctgcagctc
cagcccggcggagaccccaggttcgaccaggacgacccgctggacgccgacctggtcgtc
gtggacgagagctccatggtcgacctgatcctcgccaacaagctggtgaaggcgatcccg
cgcggcgcgcacctgctgctcgtcggggacgtcgaccagctcccgtccgtcggcgcgggc
gaggtgctggccgacctgctcggtgcggaggcgatcccgcgggtccggctcacgaagatc
ttccggcaggcgcagcggtccgggatcgtcgtcaacgcgcaccgcgtcaactccggcgac
cacccccacacgcgcggctacgacgacttcttcctgttcccgtgcgaggagcaggacgag
gccgccgagatgaccgtggacgtcgtcgccaaccggatcccgcgcaggttcggcctcgac
ccgcgccgcgacgtccaggtcctcacgcccatgcaccgcggcgcggccggggcggggacg
ctgaacacgatgctccaggaggcgctgaccccgcacgacgacgcccgccccgaacgccgc
tacggcgggcgcgtgttccgcgtcggcgacaaggtcacccagctccgcaacaactacgac
aagggcgaggcgggcgtcttcaacggcaccgtcggcgtcgtcacgtccgtctccctcgaa
gagcagtcgctcaccgtcctgaccgacgaggacgagagcatcgactacgccttcgacgag
ctggacgagctcgcccacgcctacgcgatcacgatccaccggtcgcagggcagcgagtac
ccggcggtcgtcgtcccgctcacgaccggcgcgtggatgatgctgcgccgcaacctgctc
tacacgggcatgacccgcgcgaagaagctcgtcgtcctcgtcgggtcacggcgggcgctg
gccgccgccgtccgcaccgccggggccggccgccgccacaccgcgctggcgcaccgcctc
tctcagcggtag
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