Actinomadura madurae: LUW76_11920
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Entry
LUW76_11920 CDS
T08933
Name
(GenBank) DNA topoisomerase IV subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
amaz
Actinomadura madurae
Brite
KEGG Orthology (KO) [BR:
amaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amaz03032
]
LUW76_11920
03400 DNA repair and recombination proteins [BR:
amaz03400
]
LUW76_11920
Enzymes [BR:
amaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LUW76_11920
DNA replication proteins [BR:
amaz03032
]
Prokaryotic type
DNA Topoisomerases
LUW76_11920
DNA repair and recombination proteins [BR:
amaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LUW76_11920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
HALZ
Motif
Other DBs
NCBI-ProteinID:
URM94975
LinkDB
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Position
2555513..2558002
Genome browser
AA seq
829 aa
AA seq
DB search
MARRGSQAPPPPPDFEENIVDVDVSDEMRGSFLEYAYSVIYQRALPDARDGMKPVQRRIL
YSMNEMGLRPDRGHVKCARVVGEVMGKLHPHGDSAIYDAMVRMAQPWAMRMPLVDGHGNF
GSLGGDDLPAAMRYTEARMSREAMLMVQSIDEDTVDFRPNYDGQEQEPEVLPAAFPNLLV
NGASGIAVGMATNMAPHNLGEVIAAARHLIDNPEADLDDLMRFVPGPDLPTGGKIVGLDG
IRDAYANGRGTFRTRATVTIESVTPRRKGIIVSELPYAVGPERVKAKIKELVNAKKIQGI
SDLKDLTDRNVGLRLVIEIKNGFNPEAVLADLYRLTPMEETFGINNVALVDGQPRTLGLR
DMLQVYVDHRIEVVRRRSMFRRKKREDRLHLVDGLLVALLNIDEVIQVIRQSDDAAQAKQ
RLMQIFELSEIQSQYILDTPLRRLTRYDRLELEKEKEQLAKEIAKLTAILESERKLRGVV
SKELGDVAKEFSTPRRTILLESSGHTAAAAVPLEVADDPCTVLLSSTGLMARTHDAGSLP
DSGPRAAHDVLTSVVPSTARGQVGAVTSLGRMIRVDVLDLPTLPPSATPPSLAGGAPVTE
YVDLEPDETVVGIAAVGEEGGGLALGTAQGVVKRVVPDFPANRDEFEVIGLKEGDRVVGA
VQLLSEEQHVVFITTDAQLLHFAASLVRPQGRAAGGMAGIKLGAGASVLWFGALDPSREA
RVITVSGSSSALPGTQTGAIKLADFADFPSKGRATGGVRAHRFLKGEDVLIQAWAAPTPL
RAGAANGRPAMLNVAMGRRDGSGERLDKPLTAISGPIGAPPPDEETPDE
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacgcggatcccaagcccctccaccgccgccggacttcgaagagaacatcgtc
gacgtcgatgtctccgacgagatgcgcggcagcttcctcgagtacgcctactcggtgatc
taccagcgggcgctgcccgacgcacgcgacggcatgaagcccgtccagcgccgcatcctg
tactcgatgaacgagatggggctgcgccccgaccgcgggcacgtcaagtgcgcccgcgtc
gtcggcgaggtcatgggcaagctgcacccgcacggcgacagcgccatctacgacgcgatg
gtgcggatggcgcagccctgggcgatgcggatgccgctcgtggacgggcacggcaacttc
ggctcgctcggcggcgacgacctgcccgccgccatgcggtacaccgaggcccggatgtcc
cgcgaagcgatgctgatggtccagtccatcgacgaggacaccgtcgacttccgcccgaac
tacgacgggcaggagcaggagccggaggtgctgcccgccgcgttcccgaacctgctggtc
aacggcgcctccgggatcgcggtcgggatggccaccaacatggcgccgcacaacctcggc
gaggtcatcgccgcggcccggcacctgatcgacaaccccgaggccgacctggacgacctg
atgcgcttcgtccccggccccgacctgcccaccggcggcaagatcgtcggcctggacggc
atccgcgacgcctacgcgaacggccggggcacgttccgcacccgcgccacggtcaccatc
gagagcgtcacgccccgccgcaagggcatcatcgtcagcgagctgccgtacgcggtcggg
cccgagcgcgtcaaggcgaagatcaaggaactggtcaacgccaagaagatccagggcatc
tccgacctgaaggacctcaccgaccgcaacgtcggcctccgcctggtcatcgagatcaag
aacggcttcaacccggaggcggtgctggccgacctctaccggctcacgccgatggaggag
acgttcggcatcaacaacgtcgccctggtcgacggccagccccgcaccctcggcctgcgc
gacatgctccaggtctacgtcgaccaccgcatcgaggtcgtccgccggcgctcgatgttc
cggcgcaagaagcgcgaggaccgcctccacctggtggacggcctgctcgtcgccctgctc
aacatcgacgaggtcatccaggtcatccggcagagcgacgacgccgcccaggccaagcag
cgcctcatgcagatcttcgagctgtcggagatccagtcgcagtacatcctggacaccccg
ctccgccggctgacccgctacgaccgcctggagctggagaaggagaaggagcagctcgcc
aaggagatcgccaagctgaccgcgatcctggagtcggagcgcaagctccgcggggtcgtc
tcgaaggagctgggcgacgtcgccaaggagttctccaccccgcgccggacgatcctgctc
gaatcctcgggccacaccgccgccgcggcggtccccctggaggtcgcggacgacccgtgc
acggtgctgctgtcgtcgaccgggctcatggcccgcacccacgacgccggctcgctgccc
gacagcggcccccgcgcggcgcacgacgtgctgacgtcggtcgtcccgtccacggcgcgc
ggccaggtcggcgcggtgacgtcgctcggccggatgatccgcgtcgacgttctcgacctg
ccgacgctgccgccctcggccacgcccccgtccctggcgggcggggcaccggtcaccgag
tacgtcgacctcgaaccggacgagacggtcgtcggcatcgccgccgtcggcgaggagggc
ggcgggctggcgctcggcaccgcgcagggcgtggtcaaacgcgtcgtcccggacttcccc
gccaaccgcgacgagttcgaggtgatcggcctcaaggagggcgaccgcgtcgtcggcgcc
gtccagctgctctccgaggagcagcacgtcgtcttcatcaccaccgacgcccagctgctg
cacttcgccgcgtccctcgtccgcccgcagggccgggccgccggcggcatggcgggcatc
aagctgggcgcgggcgcgagcgtgctgtggttcggcgcgctcgacccgtcccgcgaggcc
cgcgtcatcacggtctccggctcgtcctcggccctgcccggcacccagaccggcgcgatc
aagctggccgacttcgccgacttcccgtccaagggccgcgccaccggcggcgtccgcgcc
caccgcttcctcaagggcgaggacgtgctgatccaggcctgggcggcgccgactccgctg
cgcgccggggccgccaacggcagaccggcgatgctgaacgtcgccatgggccgccgggac
gggtccggcgagagactggacaagcccctgaccgccatcagcggcccgatcggtgccccg
ccccctgacgaggagacccccgacgagtga
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