KEGG   Actinomadura madurae: LUW76_11985
Entry
LUW76_11985       CDS       T08933                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03086  RNA polymerase primary sigma factor
Organism
amaz  Actinomadura madurae
Brite
KEGG Orthology (KO) [BR:amaz00001]
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    LUW76_11985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amaz03021]
    LUW76_11985
Transcription machinery [BR:amaz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LUW76_11985
SSDB
Motif
Pfam: Sigma70_r3 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Sigma70_r1_1
Other DBs
NCBI-ProteinID: URM94986
LinkDB
Position
complement(2568116..2569783)
AA seq 555 aa
MSPASSTSKASDLHDHVIAQLIERGRSQGYLDADDVRRTFEEADIPVSKASSILRSLSKE
GVTVMVSAADSAAPKRPRKRATQPARRPKTAAAAKEQPDTVTAVVGDDAPEEAVAEPRPA
APKPAPPKKAAPAKGAKAKGKKAAPVKKAAAPAAAPAAKAAPAKKGDEPEVDDEVDVDVD
LDEDLTDLDVELEDDAAAEVEEPEAEGDEAPAAPAAAKPAPGAKPDAPTEEEGFTLGDDD
EDAPAQQIAAAGATADPVKDYLKQIGKVPLLNAEQEVELAKRIEAGLFAEERLAASGPAM
SEEDLEDFEWIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVE
KFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGRE
PTPEELAKELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAIVPADAVSF
TLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSK
LRHPSRSQVLRDYLD
NT seq 1668 nt   +upstreamnt  +downstreamnt
gtgtcgcctgctagctcgacctcgaaagcgtcagatctgcacgatcacgtcatcgcgcaa
ctgatcgagcgtggacggtcccagggttacctcgacgccgacgacgtacgacgtacgttc
gaggaggccgacatccccgtgtcgaaggcctccagcattctgcggagcctcagcaaggag
ggtgtgaccgtcatggtgagcgctgccgactccgcggcgcccaagcgtccgcgcaagcgc
gcgacgcagccggcacgcaggcccaagaccgccgccgccgccaaggagcagcccgatacg
gtgaccgccgtcgtcggcgacgacgcgccggaggaggccgtcgccgagccccgcccggcg
gcccccaagcccgcgccgcccaagaaggccgcgcccgccaagggcgccaaggccaagggc
aagaaggcggcgcccgtcaagaaggccgcggccccggccgccgcgccggccgccaaggcc
gcgccggccaagaagggcgacgagccggaggtcgacgacgaggtcgacgtggacgtcgac
ctcgacgaggacctgaccgacctcgacgtcgagctggaggacgacgcggccgccgaggtc
gaggagcccgaggccgagggggacgaggcgccggccgcgcccgccgccgccaagcccgcg
cccggcgccaagccggacgctccgaccgaggaggagggcttcaccctcggcgacgacgac
gaggacgcgcccgcccagcagatcgcggccgccggcgccaccgccgacccggtcaaggac
tacctcaagcagatcggcaaggtccccctgctgaacgccgagcaggaggtggagctcgcc
aagcggatcgaggccgggctcttcgccgaggagcggctcgccgcgtccggtcccgcgatg
tccgaggaggacctcgaggacttcgagtggatcgccgaggacggccgccgcgccaagaac
cacctcctggaggccaacctccgcctggtggtctcgctcgccaagcgctacaccgggcgc
gggatgctgttcctggacctgatccaggagggcaacctcggcctgatccgcgcggtcgag
aagttcgactacaccaagggctacaagttctccacgtacgccacctggtggatccggcag
gcgatcacccgcgcgatggccgaccaggcccgcaccatccgcatcccggtgcacatggtc
gaggtcatcaacaagctggcgcgggtgcagcggcagatgctccaggacctgggccgcgag
cccaccccggaggagctggccaaggagctcgacatgaccccggagaaggtcgtcgaggtc
cagaagtacggccgcgagcccatctccctgcacacgccgctcggcgaggacggcgacagc
gagttcggagacctcatcgaggactccgaggcgatcgtcccggcggacgcggtcagcttc
acgctgctgcaggagcagctgcactccgtcctggacacgctcagcgagcgtgaggcgggc
gtggtgtcgatgaggttcggcctcaccgacgggcagccgaagacgctggacgagatcggc
aaggtgtacggggtgacccgcgagcgcatccggcagatcgagtccaagacgatgtcgaag
ctgcgtcacccgtcccgttcccaggtgctgcgcgactacctggactga

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