Actinomadura madurae: LUW76_11985
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Entry
LUW76_11985 CDS
T08933
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
amaz
Actinomadura madurae
Brite
KEGG Orthology (KO) [BR:
amaz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LUW76_11985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amaz03021
]
LUW76_11985
Transcription machinery [BR:
amaz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LUW76_11985
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r1_1
Motif
Other DBs
NCBI-ProteinID:
URM94986
LinkDB
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Position
complement(2568116..2569783)
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AA seq
555 aa
AA seq
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MSPASSTSKASDLHDHVIAQLIERGRSQGYLDADDVRRTFEEADIPVSKASSILRSLSKE
GVTVMVSAADSAAPKRPRKRATQPARRPKTAAAAKEQPDTVTAVVGDDAPEEAVAEPRPA
APKPAPPKKAAPAKGAKAKGKKAAPVKKAAAPAAAPAAKAAPAKKGDEPEVDDEVDVDVD
LDEDLTDLDVELEDDAAAEVEEPEAEGDEAPAAPAAAKPAPGAKPDAPTEEEGFTLGDDD
EDAPAQQIAAAGATADPVKDYLKQIGKVPLLNAEQEVELAKRIEAGLFAEERLAASGPAM
SEEDLEDFEWIAEDGRRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVE
KFDYTKGYKFSTYATWWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGRE
PTPEELAKELDMTPEKVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAIVPADAVSF
TLLQEQLHSVLDTLSEREAGVVSMRFGLTDGQPKTLDEIGKVYGVTRERIRQIESKTMSK
LRHPSRSQVLRDYLD
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcctgctagctcgacctcgaaagcgtcagatctgcacgatcacgtcatcgcgcaa
ctgatcgagcgtggacggtcccagggttacctcgacgccgacgacgtacgacgtacgttc
gaggaggccgacatccccgtgtcgaaggcctccagcattctgcggagcctcagcaaggag
ggtgtgaccgtcatggtgagcgctgccgactccgcggcgcccaagcgtccgcgcaagcgc
gcgacgcagccggcacgcaggcccaagaccgccgccgccgccaaggagcagcccgatacg
gtgaccgccgtcgtcggcgacgacgcgccggaggaggccgtcgccgagccccgcccggcg
gcccccaagcccgcgccgcccaagaaggccgcgcccgccaagggcgccaaggccaagggc
aagaaggcggcgcccgtcaagaaggccgcggccccggccgccgcgccggccgccaaggcc
gcgccggccaagaagggcgacgagccggaggtcgacgacgaggtcgacgtggacgtcgac
ctcgacgaggacctgaccgacctcgacgtcgagctggaggacgacgcggccgccgaggtc
gaggagcccgaggccgagggggacgaggcgccggccgcgcccgccgccgccaagcccgcg
cccggcgccaagccggacgctccgaccgaggaggagggcttcaccctcggcgacgacgac
gaggacgcgcccgcccagcagatcgcggccgccggcgccaccgccgacccggtcaaggac
tacctcaagcagatcggcaaggtccccctgctgaacgccgagcaggaggtggagctcgcc
aagcggatcgaggccgggctcttcgccgaggagcggctcgccgcgtccggtcccgcgatg
tccgaggaggacctcgaggacttcgagtggatcgccgaggacggccgccgcgccaagaac
cacctcctggaggccaacctccgcctggtggtctcgctcgccaagcgctacaccgggcgc
gggatgctgttcctggacctgatccaggagggcaacctcggcctgatccgcgcggtcgag
aagttcgactacaccaagggctacaagttctccacgtacgccacctggtggatccggcag
gcgatcacccgcgcgatggccgaccaggcccgcaccatccgcatcccggtgcacatggtc
gaggtcatcaacaagctggcgcgggtgcagcggcagatgctccaggacctgggccgcgag
cccaccccggaggagctggccaaggagctcgacatgaccccggagaaggtcgtcgaggtc
cagaagtacggccgcgagcccatctccctgcacacgccgctcggcgaggacggcgacagc
gagttcggagacctcatcgaggactccgaggcgatcgtcccggcggacgcggtcagcttc
acgctgctgcaggagcagctgcactccgtcctggacacgctcagcgagcgtgaggcgggc
gtggtgtcgatgaggttcggcctcaccgacgggcagccgaagacgctggacgagatcggc
aaggtgtacggggtgacccgcgagcgcatccggcagatcgagtccaagacgatgtcgaag
ctgcgtcacccgtcccgttcccaggtgctgcgcgactacctggactga
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