Actinomadura madurae: LUW76_12575
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Entry
LUW76_12575 CDS
T08933
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
amaz
Actinomadura madurae
Pathway
amaz00550
Peptidoglycan biosynthesis
amaz01100
Metabolic pathways
amaz01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
amaz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LUW76_12575 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LUW76_12575 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amaz01011
]
LUW76_12575 (mrdA)
Enzymes [BR:
amaz01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LUW76_12575 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
amaz01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
LUW76_12575 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
URM95085
LinkDB
All DBs
Position
complement(2694898..2696970)
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AA seq
690 aa
AA seq
DB search
MNPRTHFRLVVLYVLVAALLLVLVGRMWALQVLEGEKYRGIAAQNRMRDIVVPATRGMIL
DDRGKPLVRNRSALVVSVDRTTLSRRKDGGEAVLKRLAGVLGTSYDEISKRIRLCGPGIK
RPCWPGSPYQPIPVEDHVDPKRALQIMERQEDFPGITAQVQAVREYPEPDGASAAQALGY
LQPVTQEELDKRKGLKVTGYSGVDLVGRAGLEAQYDAALRGEPGFRRVLVDSQGRVTGTA
EEQAPMAGYNLVTSIDAGVQGAAEKALKHAIDGARKAGRPADAGAAVVMDVQTGKMIAMA
SFPTYDPSIWTGGISQEEYDALLGKKKGEPLISRVTQGQFAPGSTFKISSVSAAVKDGNS
LNGIYPCPGSYNVGNRAFRNFEGQSLGPMSLHTALVKSCDTIFYRFAYQEWQRDGGMKPK
KNPSDPMVKMAREYGFGSRTGIDLPSESEGRIPDRGWKKDFWETTKAANCKGAKEGYPNV
AKTDPARAAYLKAVATENCTEGYVWRPGDAANFSVGQGDVLVTPLQLVRAYAALANGGKL
LAPRLGVAVVRADGTVVRRIEAPPPEKLPVEARTLKYIRKALADVPKSGTAAGAFSGFDF
KRVDVGGKTGTAEVYGKQDTSWFASFGPVKKPRFAVVAMVSQGGQGAQTAGPAVREIWEA
MYGTKDRKPLLDDGKLPSELPKMPGEGAAP
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccgcgcacccacttccggctcgtcgtcctgtacgtgctcgtcgcggcgctgctg
ctcgtcctcgtcgggcggatgtgggcgctgcaggtcctggagggcgagaagtaccggggg
atcgccgcccagaaccgcatgcgcgacatcgtcgtccccgccacccgcggcatgatcctc
gacgaccggggcaagccgctcgtccgcaaccgcagcgcgctcgtcgtgtcggtcgaccgc
accacgctgtcgcggcgcaaggacggcggcgaggccgtgctgaaacggctcgcgggcgtc
ctcgggacgagctacgacgagatctccaagcggatccggctgtgcgggccggggatcaag
cggccctgctggcccgggtcgccgtaccagccgatcccggtcgaggaccacgtcgacccc
aagcgggccctccagatcatggagcggcaggaggacttccccggcatcaccgcgcaggtc
caggccgtccgggagtacccggagccggacggcgcgagcgccgcgcaggccctcggctac
ctccagcccgtgacgcaggaggagctcgacaagcgcaagggcctcaaggtcaccggctac
agcggcgtcgacctggtggggcgggccggcctggaggcgcagtacgacgcggcgctgcgc
ggcgagccgggcttccgcagggtcctcgtcgacagccagggacgcgtcaccggcaccgcc
gaggagcaggcgccgatggccggctacaacctcgtcaccagcatcgacgccggggtgcag
ggcgcggcggagaaggccctcaagcacgcgatcgacggggcgcgcaaggcgggccgcccc
gccgacgccggcgccgcggtcgtgatggacgtgcagaccggcaagatgatcgcgatggcg
agcttcccgacctacgacccgagcatctggaccggcggcatctcccaggaggagtacgac
gcgctgctcggcaagaagaagggcgagccgctcatctcccgcgtcacccaggggcagttc
gcccccggctccaccttcaagatctcctcggtgtccgccgcggtgaaggacggcaacagc
ctgaacggcatctacccctgcccgggctcctacaacgtcggcaaccgcgcgttccgcaac
ttcgagggccagtcgctcggcccgatgtcgctgcacacggcgctcgtcaagtcctgcgac
acgatcttctaccgcttcgcgtaccaggagtggcagcgcgacggcgggatgaagccgaag
aagaacccgtccgacccgatggtgaagatggcccgcgagtacgggttcgggtcgcgcacc
ggcatcgacctcccgagcgagagtgagggccgcatcccggaccgggggtggaagaaggac
ttctgggagaccaccaaggccgccaactgcaagggcgccaaggagggctacccgaacgtc
gccaagaccgacccggcccgcgccgcctacctgaaggcggtcgcgacggagaactgcacc
gaggggtacgtctggcggcccggtgacgcggcgaacttctcggtcggtcagggcgacgtc
ctggtcacgccgctgcagctcgtccgcgcctacgcggcgctggcgaacggcggcaagctg
ctcgccccgcggctcggcgtcgcggtcgtgcgcgcggacgggacggtcgtgcgccggatc
gaggccccgccgccggagaagctgcccgtcgaggcgcggacgctgaagtacatccgcaag
gccctcgcggacgtgccgaagagcggtaccgcggccggcgcgttctccgggttcgacttc
aagcgcgtcgacgtgggcggcaagaccggcaccgcggaggtgtacggcaagcaggacacc
tcctggttcgcctccttcggcccggtgaagaagccgcggttcgcggtggtcgcgatggtc
tcccagggcgggcagggcgcgcagacggcgggcccggccgtgcgggagatctgggaggcc
atgtacgggacgaaggacaggaagccgctgctcgacgacggcaagcttccgtccgagctg
ccgaagatgcccggcgagggggccgccccgtga
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