Actinomadura madurae: LUW76_24920
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Entry
LUW76_24920 CDS
T08933
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
amaz
Actinomadura madurae
Pathway
amaz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amaz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LUW76_24920 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amaz03019
]
LUW76_24920 (recQ)
03400 DNA repair and recombination proteins [BR:
amaz03400
]
LUW76_24920 (recQ)
Enzymes [BR:
amaz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LUW76_24920 (recQ)
Messenger RNA biogenesis [BR:
amaz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LUW76_24920 (recQ)
DNA repair and recombination proteins [BR:
amaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LUW76_24920 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
URM97332
LinkDB
All DBs
Position
5361263..5363092
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AA seq
609 aa
AA seq
DB search
MTSPEIPETLDALRRVFGYDTFRDGQREIIEHVVAGGDALVLMPTGGGKSLCYQIPALVR
KGTGIVISPLIALMQDQVDALRTAGVQAGFLNSTQDLDERRVVEAQFVAGELDLLYLAPE
RLKLASTVELLDRGDVSLFAIDEAHCVSQWGHDFRPDYLMLSGLHERWPDVPRIALTATA
TEATRREIASRLQLEQARHFVASFDRPNIQYRIEPKTDPKRQLLRLLRNEHKGDAGIVYC
LSRNSVEKHAAFLTENGIEALPYHAGLDSETRAANQARFLREDGLVIVATIAFGMGIDKP
DVRFVAHLDLPKSVEGYYQETGRAGRDGLPSTAWLAYGLQDVVNLRKMIDGGEGDAAHRR
RQSQHLDSMLALCETVECRRVQLLNYFGQSGEPCGNCDTCLKPPETWDATISAQKVLSVI
VRLDRERRQKFGAGHIVDILLGKKNAKVIQFDHDALKSFGIGTELRDVEWRGVIRQLLAQ
GLVAVESNHGTLVLTDTSADVLRGRRQVMMRREPERPTAKAAKTAKAAKAPVELPAEAAP
VFERLRSWRAATAKEQGVPAYVIFHDATLREIATALPTTLTELGRVNGVGENKLAKYGDQ
VLETLATPT
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcccctgagattccggagaccctcgacgccctgcggcgcgtgttcggctacgac
acgttccgggacggccagcgggagatcatcgaacacgtcgtcgccggcggggacgcgctc
gtcctgatgccgaccggcggcgggaagtcgctgtgctaccagatcccggcgctcgtccgg
aagggcaccggcatcgtcatctccccgctcatcgccctcatgcaggaccaggtggacgcg
ctgcgcaccgccggcgtccaggcgggcttcctcaactccacgcaggacctcgacgagcgg
cgggtcgtcgaggcgcagttcgtcgcgggcgagctcgacctgctgtacctggcgccggag
cggctgaagctcgcctcgaccgtcgagctgctcgaccggggcgacgtctcgctcttcgcg
atcgacgaggcgcactgcgtgtcccagtgggggcacgacttccgtcccgactacctgatg
ctgtccggcctgcacgaacgctggccggacgtcccgcgcatcgccctcaccgcgaccgcc
accgaggcgacccgccgcgagatcgcgtcccggctccagctggagcaggcccggcacttc
gtggcgagcttcgaccgtccgaacatccagtaccggatcgagccgaagaccgaccccaaa
cgccagctgctccgcctgctccggaacgagcacaagggcgacgcggggatcgtctactgc
ctgtcccgcaactccgtggagaagcacgccgccttcctcaccgagaacggcatcgaggcc
ctcccgtaccacgcgggcctggactccgagacgcgcgccgcgaaccaggcgcgcttcctc
cgggaggacggcctcgtcatcgtcgcgaccatcgcgttcggcatggggatcgacaaaccc
gacgtccggttcgtcgcgcacctcgacctgccgaagtccgtcgagggctactaccaggag
acgggccgcgccgggcgcgacggcctgccgtccaccgcctggctcgcctacggcctccag
gacgtcgtcaacctgcgcaagatgatcgacggcggcgagggcgacgccgcccaccgccgc
cgccagagccagcacctcgactccatgctggccctttgcgagacggtcgagtgccgccgc
gtccagctgctgaactacttcggccagtccggcgagccctgcggcaactgcgacacgtgc
ctgaagccgcccgagacgtgggacgcgaccatctccgcccagaaggtgctgtcggtgatc
gtccgcctcgaccgggaacggcgccagaagttcggcgccggccacatcgtcgacatcctc
ctcggcaagaagaacgccaaggtcatccagttcgaccacgacgcgctgaagtccttcggc
atcggcaccgaactgcgcgacgtcgagtggcgcggcgtcatccgccagctcctcgcgcag
gggctcgtcgccgtggagagcaaccacggaaccctcgtcctgaccgacaccagcgccgac
gtcctgcgcgggcggcgccaggtgatgatgcgccgcgaaccggaacgtcccaccgcgaag
gcggcgaagaccgccaaggccgccaaggccccggtcgaactccccgccgaggcggccccg
gtcttcgaacgcctccgctcctggcgcgccgccaccgcgaaggagcagggcgtccccgcc
tacgtcatcttccacgacgccaccctgcgcgagatagccaccgccctccccaccaccctc
accgaactgggccgagtcaacggcgtaggcgagaacaaactggccaaatacggcgaccag
gtcctggaaaccctcgccacccccacctga
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